Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 HLA-G-202ENST00000376815 851 ntBASIC21.84■■□□□ 1.09
PMS1P54277 HLA-G-203ENST00000376818 1127 ntBASIC21.84■■□□□ 1.09
PMS1P54277 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.84■■□□□ 1.09
PMS1P54277 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.84■■□□□ 1.09
PMS1P54277 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.84■■□□□ 1.09
PMS1P54277 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PMS1P54277 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 AC005332.7-201ENST00000614046 2005 ntBASIC21.84■■□□□ 1.09
PMS1P54277 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
PMS1P54277 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.83■■□□□ 1.09
PMS1P54277 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PMS1P54277 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PMS1P54277 GUSBP6-202ENST00000438529 1198 ntBASIC21.83■■□□□ 1.09
PMS1P54277 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.83■■□□□ 1.09
PMS1P54277 AC083906.2-201ENST00000511578 360 ntBASIC21.83■■□□□ 1.09
PMS1P54277 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PMS1P54277 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PMS1P54277 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PMS1P54277 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PMS1P54277 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PMS1P54277 PHGDH-210ENST00000641115 1638 ntBASIC21.83■■□□□ 1.08
PMS1P54277 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.83■■□□□ 1.08
PMS1P54277 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PMS1P54277 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PMS1P54277 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.82■■□□□ 1.08
PMS1P54277 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.82■■□□□ 1.08
PMS1P54277 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PMS1P54277 MIPEPP3-201ENST00000412105 444 ntBASIC21.82■■□□□ 1.08
PMS1P54277 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.82■■□□□ 1.08
PMS1P54277 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PMS1P54277 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PMS1P54277 AP001271.2-201ENST00000624018 1556 ntBASIC21.82■■□□□ 1.08
PMS1P54277 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PMS1P54277 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS1P54277 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PMS1P54277 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PMS1P54277 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PMS1P54277 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.81■■□□□ 1.08
PMS1P54277 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.81■■□□□ 1.08
PMS1P54277 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.81■■□□□ 1.08
PMS1P54277 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.81■■□□□ 1.08
PMS1P54277 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS1P54277 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PMS1P54277 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.81■■□□□ 1.08
PMS1P54277 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PMS1P54277 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.8■■□□□ 1.08
PMS1P54277 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.8■■□□□ 1.08
PMS1P54277 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PMS1P54277 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS1P54277 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PMS1P54277 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.79■■□□□ 1.08
PMS1P54277 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PMS1P54277 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms