RNA–Protein interactions for RNA: ENST00000394374.6

MEN1-208, Transcript of menin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MEN1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-208ENST00000394374 NISCHQ9Y2I1 1504 aa41■■■■■ 4.15
MEN1-208ENST00000394374 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
MEN1-208ENST00000394374 DCAF8L2P0C7V8 631 aa35.25■■■■□ 3.23
MEN1-208ENST00000394374 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
MEN1-208ENST00000394374 SUPT5HO00267 1087 aaKnown RBP34.47■■■■□ 3.11
MEN1-208ENST00000394374 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
MEN1-208ENST00000394374 ABCC9O60706 1549 aa33.51■■■□□ 2.95
MEN1-208ENST00000394374 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.91
MEN1-208ENST00000394374 SCRIBQ14160 1630 aa33.07■■■□□ 2.88
MEN1-208ENST00000394374 CHIC1Q5VXU3 224 aa32.84■■■□□ 2.85
MEN1-208ENST00000394374 MYO15BQ96JP2 1530 aa32.48■■■□□ 2.79
MEN1-208ENST00000394374 NACADO15069 1562 aa32.44■■■□□ 2.78
MEN1-208ENST00000394374 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
MEN1-208ENST00000394374 CECR2Q9BXF3 1484 aa32.32■■■□□ 2.76
MEN1-208ENST00000394374 PABPN1Q86U42 306 aaKnown RBP eCLIP32.21■■■□□ 2.75
MEN1-208ENST00000394374 LOC105371045A0A1W2PR82 267 aa32.18■■■□□ 2.74
MEN1-208ENST00000394374 RB1CC1Q8TDY2 1594 aa32.13■■■□□ 2.73
MEN1-208ENST00000394374 EHMT2Q96KQ7 1210 aa32.07■■■□□ 2.72
MEN1-208ENST00000394374 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.72
MEN1-208ENST00000394374 FAM9AQ8IZU1 332 aaPredicted RBP32.01■■■□□ 2.72
MEN1-208ENST00000394374 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
MEN1-208ENST00000394374 WIZO95785 1651 aa31.79■■■□□ 2.68
MEN1-208ENST00000394374 PCGF6Q9BYE7 350 aa31.56■■■□□ 2.64
MEN1-208ENST00000394374 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
MEN1-208ENST00000394374 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
MEN1-208ENST00000394374 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
MEN1-208ENST00000394374 SMARCA4P51532 1647 aa31.29■■■□□ 2.6
MEN1-208ENST00000394374 CCDC88BA6NC98 1476 aa31.17■■■□□ 2.58
MEN1-208ENST00000394374 TOP2AP11388 1531 aaKnown RBP31.07■■■□□ 2.56
MEN1-208ENST00000394374 PPARGC1BQ86YN6 1023 aaKnown RBP31.06■■■□□ 2.56
MEN1-208ENST00000394374 ABCC8Q09428 1581 aa31.04■■■□□ 2.56
MEN1-208ENST00000394374 SMARCA2P51531 1590 aa30.95■■■□□ 2.55
MEN1-208ENST00000394374 TTBK1Q5TCY1 1321 aaPredicted RBP30.79■■■□□ 2.52
MEN1-208ENST00000394374 HRCP23327 699 aa30.77■■■□□ 2.52
MEN1-208ENST00000394374 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
MEN1-208ENST00000394374 TRIM26Q12899 539 aaPredicted RBP30.72■■■□□ 2.51
MEN1-208ENST00000394374 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
MEN1-208ENST00000394374 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
MEN1-208ENST00000394374 SOGA1O94964 1423 aa30.7■■■□□ 2.5
MEN1-208ENST00000394374 UBTFP17480 764 aaKnown RBP30.62■■■□□ 2.49
MEN1-208ENST00000394374 RUSC2Q8N2Y8 1516 aa30.6■■■□□ 2.49
MEN1-208ENST00000394374 RANGAP1P46060 587 aaPredicted RBP30.58■■■□□ 2.49
MEN1-208ENST00000394374 CSRNP3Q8WYN3 585 aa30.5■■■□□ 2.47
MEN1-208ENST00000394374 WRNQ14191 1432 aaPredicted RBP eCLIP30.49■■■□□ 2.47
MEN1-208ENST00000394374 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
MEN1-208ENST00000394374 SYNJ1O43426 1573 aa30.26■■■□□ 2.43
MEN1-208ENST00000394374 CEP162Q5TB80 1403 aa30.17■■■□□ 2.42
MEN1-208ENST00000394374 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
MEN1-208ENST00000394374 TNIKQ9UKE5 1360 aa30.02■■■□□ 2.4
MEN1-208ENST00000394374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30■■■□□ 2.39
MEN1-208ENST00000394374 EEA1Q15075 1411 aa29.98■■■□□ 2.39
MEN1-208ENST00000394374 GOLGA3Q08378 1498 aa29.96■■■□□ 2.39
MEN1-208ENST00000394374 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
MEN1-208ENST00000394374 RAPGEF2Q9Y4G8 1499 aa29.89■■■□□ 2.38
MEN1-208ENST00000394374 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
MEN1-208ENST00000394374 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
MEN1-208ENST00000394374 CEP164Q9UPV0 1460 aa29.81■■■□□ 2.36
MEN1-208ENST00000394374 CFTRP13569 1480 aa29.79■■■□□ 2.36
MEN1-208ENST00000394374 CCER1Q8TC90 406 aaPredicted RBP29.79■■■□□ 2.36
MEN1-208ENST00000394374 CUX1P39880 1505 aa29.78■■■□□ 2.36
MEN1-208ENST00000394374 CLIP1P30622 1438 aa29.77■■■□□ 2.36
MEN1-208ENST00000394374 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
MEN1-208ENST00000394374 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
MEN1-208ENST00000394374 APLP2Q06481 763 aa29.71■■■□□ 2.35
MEN1-208ENST00000394374 HNRNPUL2Q1KMD3 747 aaKnown RBP29.68■■■□□ 2.34
MEN1-208ENST00000394374 NESP48681 1621 aa29.63■■■□□ 2.33
MEN1-208ENST00000394374 ZEB1P37275 1124 aaPredicted RBP29.59■■■□□ 2.33
MEN1-208ENST00000394374 KIF27Q86VH2 1401 aa29.58■■■□□ 2.33
MEN1-208ENST00000394374 KIF21BO75037 1637 aa29.55■■■□□ 2.32
MEN1-208ENST00000394374 CUX2O14529 1486 aa29.54■■■□□ 2.32
MEN1-208ENST00000394374 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
MEN1-208ENST00000394374 P3H3Q8IVL6 736 aa29.48■■■□□ 2.31
MEN1-208ENST00000394374 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.31
MEN1-208ENST00000394374 FGD5Q6ZNL6 1462 aa29.43■■■□□ 2.3
MEN1-208ENST00000394374 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
MEN1-208ENST00000394374 ATP1B4Q9UN42 357 aaPredicted RBP29.42■■■□□ 2.3
MEN1-208ENST00000394374 VPS8Q8N3P4 1428 aa29.41■■■□□ 2.3
MEN1-208ENST00000394374 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
MEN1-208ENST00000394374 IGF1RP08069 1367 aa29.37■■■□□ 2.29
MEN1-208ENST00000394374 KANK4Q5T7N3 995 aaPredicted RBP29.36■■■□□ 2.29
MEN1-208ENST00000394374 CARMIL1Q5VZK9 1371 aa29.29■■■□□ 2.28
MEN1-208ENST00000394374 ITGAEP38570 1179 aa29.29■■■□□ 2.28
MEN1-208ENST00000394374 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
MEN1-208ENST00000394374 TDRD9Q8NDG6 1382 aaKnown RBP29.19■■■□□ 2.26
MEN1-208ENST00000394374 ERICH3Q5RHP9 1530 aa29.18■■■□□ 2.26
MEN1-208ENST00000394374 TOPBP1Q92547 1522 aa29.13■■■□□ 2.25
MEN1-208ENST00000394374 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
MEN1-208ENST00000394374 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
MEN1-208ENST00000394374 ARHGAP35Q9NRY4 1499 aa29.09■■■□□ 2.25
MEN1-208ENST00000394374 URB2Q14146 1524 aaKnown RBP29.01■■■□□ 2.24
MEN1-208ENST00000394374 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
MEN1-208ENST00000394374 PDS5BQ9NTI5 1447 aa28.95■■■□□ 2.23
MEN1-208ENST00000394374 FHOD3Q2V2M9 1422 aa28.9■■■□□ 2.22
MEN1-208ENST00000394374 ARID3CA6NKF2 412 aa28.87■■■□□ 2.21
MEN1-208ENST00000394374 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
MEN1-208ENST00000394374 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
MEN1-208ENST00000394374 FAM50AQ14320 339 aaKnown RBP28.86■■■□□ 2.21
MEN1-208ENST00000394374 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
MEN1-208ENST00000394374 AQRO60306 1485 aaKnown RBP eCLIP28.76■■■□□ 2.192e-6■■■■■ 31.7
MEN1-208ENST00000394374 GAPVD1Q14C86 1478 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms