RNA–Protein interactions for RNA: ENST00000313064.2

LINC00471-201, long intergenic non-protein coding RNA 471, humanhuman

TSL 1 (best) BASIC

Gene LINC00471, Length 1,282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471-201ENST00000313064 NISCHQ9Y2I1 1504 aa49.9■■■■■ 5.58
LINC00471-201ENST00000313064 CCDC180Q9P1Z9 1646 aa44.55■■■■■ 4.72
LINC00471-201ENST00000313064 ABCC9O60706 1549 aa43.73■■■■■ 4.59
LINC00471-201ENST00000313064 RB1CC1Q8TDY2 1594 aa42■■■■■ 4.31
LINC00471-201ENST00000313064 NACADO15069 1562 aa41.86■■■■■ 4.29
LINC00471-201ENST00000313064 DCAF8L2P0C7V8 631 aa41.78■■■■■ 4.28
LINC00471-201ENST00000313064 ZCCHC6Q5VYS8 1495 aaKnown RBP41.55■■■■■ 4.24
LINC00471-201ENST00000313064 MYO15BQ96JP2 1530 aa41.48■■■■■ 4.23
LINC00471-201ENST00000313064 DCAF1Q9Y4B6 1507 aa41.24■■■■■ 4.19
LINC00471-201ENST00000313064 UNC13AQ9UPW8 1703 aa41.12■■■■■ 4.17
LINC00471-201ENST00000313064 PABPN1Q86U42 306 aaKnown RBP eCLIP40.76■■■■■ 4.12
LINC00471-201ENST00000313064 BICRAQ9NZM4 1560 aa40.68■■■■■ 4.1
LINC00471-201ENST00000313064 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
LINC00471-201ENST00000313064 SHROOM4Q9ULL8 1493 aa40.24■■■■■ 4.03
LINC00471-201ENST00000313064 DNAJC5BQ9UF47 199 aa40.15■■■■■ 4.02
LINC00471-201ENST00000313064 EIF4G1Q04637 1599 aaKnown RBP39.66■■■■□ 3.94
LINC00471-201ENST00000313064 CC2D2AQ9P2K1 1620 aa39.56■■■■□ 3.92
LINC00471-201ENST00000313064 CECR2Q9BXF3 1484 aa39.3■■■■□ 3.88
LINC00471-201ENST00000313064 SMARCA4P51532 1647 aa38.83■■■■□ 3.81
LINC00471-201ENST00000313064 BAZ1AQ9NRL2 1556 aaPredicted RBP38.73■■■■□ 3.79
LINC00471-201ENST00000313064 SMARCA2P51531 1590 aa38.59■■■■□ 3.77
LINC00471-201ENST00000313064 ATAD2BQ9ULI0 1458 aa38.58■■■■□ 3.77
LINC00471-201ENST00000313064 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
LINC00471-201ENST00000313064 MROH2BQ7Z745 1585 aa38.46■■■■□ 3.75
LINC00471-201ENST00000313064 HMGXB3Q12766 1538 aa38.44■■■■□ 3.74
LINC00471-201ENST00000313064 PEG3Q9GZU2 1588 aa38.38■■■■□ 3.73
LINC00471-201ENST00000313064 BAZ1BQ9UIG0 1483 aaKnown RBP38.33■■■■□ 3.73
LINC00471-201ENST00000313064 WIZO95785 1651 aa38.11■■■■□ 3.69
LINC00471-201ENST00000313064 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
LINC00471-201ENST00000313064 NESP48681 1621 aa37.76■■■■□ 3.64
LINC00471-201ENST00000313064 ERCC6Q03468 1493 aa37.76■■■■□ 3.63
LINC00471-201ENST00000313064 LAMC3Q9Y6N6 1575 aa37.67■■■■□ 3.62
LINC00471-201ENST00000313064 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
LINC00471-201ENST00000313064 CADPSQ9ULU8 1353 aa37.43■■■■□ 3.58
LINC00471-201ENST00000313064 KIF21AQ7Z4S6 1674 aa37.42■■■■□ 3.58
LINC00471-201ENST00000313064 PDS5BQ9NTI5 1447 aa37.37■■■■□ 3.57
LINC00471-201ENST00000313064 CUX2O14529 1486 aa37.36■■■■□ 3.57
LINC00471-201ENST00000313064 THOC2Q8NI27 1593 aaKnown RBP37.29■■■■□ 3.56
LINC00471-201ENST00000313064 CFTRP13569 1480 aa37.19■■■■□ 3.54
LINC00471-201ENST00000313064 CCDC88BA6NC98 1476 aa37.16■■■■□ 3.54
LINC00471-201ENST00000313064 PRDM2Q13029 1718 aa37.09■■■■□ 3.53
LINC00471-201ENST00000313064 CEP164Q9UPV0 1460 aa37.08■■■■□ 3.53
LINC00471-201ENST00000313064 FANCD2Q9BXW9 1451 aa37.07■■■■□ 3.53
LINC00471-201ENST00000313064 MRC2Q9UBG0 1479 aa37.05■■■■□ 3.52
LINC00471-201ENST00000313064 WDR62O43379 1518 aa36.93■■■■□ 3.5
LINC00471-201ENST00000313064 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
LINC00471-201ENST00000313064 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.47
LINC00471-201ENST00000313064 TOPBP1Q92547 1522 aa36.46■■■■□ 3.43
LINC00471-201ENST00000313064 DNMBPQ6XZF7 1577 aa36.44■■■■□ 3.42
LINC00471-201ENST00000313064 ABCC8Q09428 1581 aa36.41■■■■□ 3.42
LINC00471-201ENST00000313064 DNAJC5Q9H3Z4 198 aa36.32■■■■□ 3.4
LINC00471-201ENST00000313064 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
LINC00471-201ENST00000313064 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
LINC00471-201ENST00000313064 CUX1P39880 1505 aa36.12■■■■□ 3.37
LINC00471-201ENST00000313064 ZNF608Q9ULD9 1512 aaPredicted RBP36.12■■■■□ 3.37
LINC00471-201ENST00000313064 TARBP1Q13395 1621 aaKnown RBP36.08■■■■□ 3.37
LINC00471-201ENST00000313064 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
LINC00471-201ENST00000313064 FGD5Q6ZNL6 1462 aa36.04■■■■□ 3.36
LINC00471-201ENST00000313064 RAD54L2Q9Y4B4 1467 aa35.97■■■■□ 3.35
LINC00471-201ENST00000313064 SOGA1O94964 1423 aa35.94■■■■□ 3.34
LINC00471-201ENST00000313064 AQRO60306 1485 aaKnown RBP eCLIP35.87■■■■□ 3.33
LINC00471-201ENST00000313064 WDR97A6NE52 1622 aa35.81■■■■□ 3.32
LINC00471-201ENST00000313064 BIVM-ERCC5R4GMW8 1640 aa35.8■■■■□ 3.32
LINC00471-201ENST00000313064 WRNQ14191 1432 aaPredicted RBP eCLIP35.8■■■■□ 3.32
LINC00471-201ENST00000313064 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
LINC00471-201ENST00000313064 TOP2BQ02880 1626 aa35.77■■■■□ 3.32
LINC00471-201ENST00000313064 TDRD9Q8NDG6 1382 aaKnown RBP35.76■■■■□ 3.32
LINC00471-201ENST00000313064 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
LINC00471-201ENST00000313064 CHD1O14646 1710 aa35.68■■■■□ 3.3
LINC00471-201ENST00000313064 ABCA10Q8WWZ4 1543 aa35.64■■■■□ 3.3
LINC00471-201ENST00000313064 PBRM1Q86U86 1689 aa35.63■■■■□ 3.29
LINC00471-201ENST00000313064 SNAPC4Q5SXM2 1469 aa35.6■■■■□ 3.29
LINC00471-201ENST00000313064 ABCA5Q8WWZ7 1642 aa35.58■■■■□ 3.29
LINC00471-201ENST00000313064 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
LINC00471-201ENST00000313064 GAPVD1Q14C86 1478 aa35.56■■■■□ 3.28
LINC00471-201ENST00000313064 FBLN2P98095 1184 aa35.52■■■■□ 3.28
LINC00471-201ENST00000313064 MAGI1Q96QZ7 1491 aaPredicted RBP35.52■■■■□ 3.28
LINC00471-201ENST00000313064 SYNJ2O15056 1496 aa35.38■■■■□ 3.25
LINC00471-201ENST00000313064 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
LINC00471-201ENST00000313064 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
LINC00471-201ENST00000313064 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
LINC00471-201ENST00000313064 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
LINC00471-201ENST00000313064 ADAMTS12P58397 1594 aa35.28■■■■□ 3.24
LINC00471-201ENST00000313064 ERICH3Q5RHP9 1530 aa35.24■■■■□ 3.23
LINC00471-201ENST00000313064 ARHGEF11O15085 1522 aa35.22■■■■□ 3.23
LINC00471-201ENST00000313064 CLASP1Q7Z460 1538 aa35.19■■■■□ 3.22
LINC00471-201ENST00000313064 TRIM41Q8WV44 630 aa35.19■■■■□ 3.22
LINC00471-201ENST00000313064 GRIN2AQ12879 1464 aa35.14■■■■□ 3.22
LINC00471-201ENST00000313064 FHAD1B1AJZ9 1412 aa35.13■■■■□ 3.21
LINC00471-201ENST00000313064 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
LINC00471-201ENST00000313064 CEP170Q5SW79 1584 aa35■■■■□ 3.19
LINC00471-201ENST00000313064 CUL7Q14999 1698 aa34.95■■■■□ 3.19
LINC00471-201ENST00000313064 NUP160Q12769 1436 aa34.95■■■■□ 3.19
LINC00471-201ENST00000313064 ARAP1Q96P48 1450 aa34.91■■■■□ 3.18
LINC00471-201ENST00000313064 IGF1RP08069 1367 aa34.86■■■■□ 3.17
LINC00471-201ENST00000313064 CYB5RLQ6IPT4 315 aa34.84■■■■□ 3.17
LINC00471-201ENST00000313064 RUSC2Q8N2Y8 1516 aa34.77■■■■□ 3.16
LINC00471-201ENST00000313064 SHROOM2Q13796 1616 aa34.76■■■■□ 3.15
LINC00471-201ENST00000313064 CARMIL1Q5VZK9 1371 aa34.7■■■■□ 3.15
LINC00471-201ENST00000313064 ERCC6L2Q5T890 1561 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms