RNA–Protein interactions for RNA: ENST00000535296.5

SLC3A2-206, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5 BASIC

Gene SLC3A2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-206ENST00000535296 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.26
SLC3A2-206ENST00000535296 CCDC180Q9P1Z9 1646 aa35.69■■■■□ 3.3
SLC3A2-206ENST00000535296 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
SLC3A2-206ENST00000535296 SHROOM4Q9ULL8 1493 aa35.01■■■■□ 3.2
SLC3A2-206ENST00000535296 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
SLC3A2-206ENST00000535296 DCAF1Q9Y4B6 1507 aa34.23■■■■□ 3.07
SLC3A2-206ENST00000535296 SUPT5HO00267 1087 aaKnown RBP34.09■■■■□ 3.05
SLC3A2-206ENST00000535296 MYO15BQ96JP2 1530 aa33.42■■■□□ 2.94
SLC3A2-206ENST00000535296 ABCC9O60706 1549 aa33.31■■■□□ 2.92
SLC3A2-206ENST00000535296 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
SLC3A2-206ENST00000535296 NACADO15069 1562 aa33.07■■■□□ 2.88
SLC3A2-206ENST00000535296 CHIC1Q5VXU3 224 aa32.99■■■□□ 2.87
SLC3A2-206ENST00000535296 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
SLC3A2-206ENST00000535296 RB1CC1Q8TDY2 1594 aa32.61■■■□□ 2.81
SLC3A2-206ENST00000535296 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
SLC3A2-206ENST00000535296 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
SLC3A2-206ENST00000535296 WIZO95785 1651 aa32.12■■■□□ 2.73
SLC3A2-206ENST00000535296 UNC13AQ9UPW8 1703 aa32.1■■■□□ 2.73
SLC3A2-206ENST00000535296 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
SLC3A2-206ENST00000535296 LOC105371045A0A1W2PR82 267 aa31.93■■■□□ 2.7
SLC3A2-206ENST00000535296 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
SLC3A2-206ENST00000535296 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
SLC3A2-206ENST00000535296 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
SLC3A2-206ENST00000535296 PABPN1Q86U42 306 aaKnown RBP eCLIP31.71■■■□□ 2.67
SLC3A2-206ENST00000535296 TOP2AP11388 1531 aaKnown RBP31.67■■■□□ 2.66
SLC3A2-206ENST00000535296 EIF4G1Q04637 1599 aaKnown RBP31.58■■■□□ 2.65
SLC3A2-206ENST00000535296 FAM9AQ8IZU1 332 aaPredicted RBP31.5■■■□□ 2.63
SLC3A2-206ENST00000535296 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
SLC3A2-206ENST00000535296 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
SLC3A2-206ENST00000535296 PCGF6Q9BYE7 350 aa31.42■■■□□ 2.62
SLC3A2-206ENST00000535296 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
SLC3A2-206ENST00000535296 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
SLC3A2-206ENST00000535296 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.58
SLC3A2-206ENST00000535296 HRCP23327 699 aa31.16■■■□□ 2.58
SLC3A2-206ENST00000535296 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
SLC3A2-206ENST00000535296 TRIM26Q12899 539 aaPredicted RBP30.99■■■□□ 2.55
SLC3A2-206ENST00000535296 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
SLC3A2-206ENST00000535296 SOGA1O94964 1423 aa30.82■■■□□ 2.52
SLC3A2-206ENST00000535296 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
SLC3A2-206ENST00000535296 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
SLC3A2-206ENST00000535296 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
SLC3A2-206ENST00000535296 EEA1Q15075 1411 aa30.64■■■□□ 2.5
SLC3A2-206ENST00000535296 NCAPD3P42695 1498 aa30.58■■■□□ 2.49
SLC3A2-206ENST00000535296 CSRNP3Q8WYN3 585 aa30.58■■■□□ 2.49
SLC3A2-206ENST00000535296 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
SLC3A2-206ENST00000535296 PPARGC1BQ86YN6 1023 aaKnown RBP30.54■■■□□ 2.48
SLC3A2-206ENST00000535296 CEP162Q5TB80 1403 aa30.48■■■□□ 2.47
SLC3A2-206ENST00000535296 TNIKQ9UKE5 1360 aa30.47■■■□□ 2.47
SLC3A2-206ENST00000535296 GOLGA3Q08378 1498 aa30.4■■■□□ 2.46
SLC3A2-206ENST00000535296 UBTFP17480 764 aaKnown RBP30.37■■■□□ 2.45
SLC3A2-206ENST00000535296 TOP2BQ02880 1626 aa30.34■■■□□ 2.45
SLC3A2-206ENST00000535296 CEP164Q9UPV0 1460 aa30.28■■■□□ 2.44
SLC3A2-206ENST00000535296 KIF21BO75037 1637 aa30.27■■■□□ 2.44
SLC3A2-206ENST00000535296 BIVM-ERCC5R4GMW8 1640 aa30.26■■■□□ 2.43
SLC3A2-206ENST00000535296 CFTRP13569 1480 aa30.2■■■□□ 2.43
SLC3A2-206ENST00000535296 CUX1P39880 1505 aa30.14■■■□□ 2.42
SLC3A2-206ENST00000535296 RAPGEF2Q9Y4G8 1499 aa30.11■■■□□ 2.41
SLC3A2-206ENST00000535296 ZEB1P37275 1124 aaPredicted RBP30.1■■■□□ 2.41
SLC3A2-206ENST00000535296 TTBK1Q5TCY1 1321 aaPredicted RBP30.09■■■□□ 2.41
SLC3A2-206ENST00000535296 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
SLC3A2-206ENST00000535296 CLIP1P30622 1438 aa30.01■■■□□ 2.4
SLC3A2-206ENST00000535296 PRDM2Q13029 1718 aa29.98■■■□□ 2.39
SLC3A2-206ENST00000535296 CADPSQ9ULU8 1353 aa29.93■■■□□ 2.38
SLC3A2-206ENST00000535296 PRXQ9BXM0 1461 aa29.9■■■□□ 2.38
SLC3A2-206ENST00000535296 ERICH3Q5RHP9 1530 aa29.87■■■□□ 2.37
SLC3A2-206ENST00000535296 KIF27Q86VH2 1401 aa29.86■■■□□ 2.37
SLC3A2-206ENST00000535296 RANGAP1P46060 587 aaPredicted RBP29.84■■■□□ 2.37
SLC3A2-206ENST00000535296 VPS8Q8N3P4 1428 aa29.84■■■□□ 2.37
SLC3A2-206ENST00000535296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.82■■■□□ 2.36
SLC3A2-206ENST00000535296 CCER1Q8TC90 406 aaPredicted RBP29.72■■■□□ 2.35
SLC3A2-206ENST00000535296 CUX2O14529 1486 aa29.67■■■□□ 2.34
SLC3A2-206ENST00000535296 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
SLC3A2-206ENST00000535296 FANCD2Q9BXW9 1451 aa29.65■■■□□ 2.34
SLC3A2-206ENST00000535296 ARAP1Q96P48 1450 aa29.62■■■□□ 2.33
SLC3A2-206ENST00000535296 APLP2Q06481 763 aa29.59■■■□□ 2.33
SLC3A2-206ENST00000535296 IGF1RP08069 1367 aa29.56■■■□□ 2.32
SLC3A2-206ENST00000535296 NESP48681 1621 aa29.56■■■□□ 2.32
SLC3A2-206ENST00000535296 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
SLC3A2-206ENST00000535296 ARHGAP35Q9NRY4 1499 aa29.43■■■□□ 2.3
SLC3A2-206ENST00000535296 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
SLC3A2-206ENST00000535296 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
SLC3A2-206ENST00000535296 HNRNPUL2Q1KMD3 747 aaKnown RBP29.41■■■□□ 2.3
SLC3A2-206ENST00000535296 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
SLC3A2-206ENST00000535296 POLA1P09884 1462 aaPredicted RBP29.37■■■□□ 2.29
SLC3A2-206ENST00000535296 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
SLC3A2-206ENST00000535296 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
SLC3A2-206ENST00000535296 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
SLC3A2-206ENST00000535296 DNAJC5BQ9UF47 199 aa29.31■■■□□ 2.28
SLC3A2-206ENST00000535296 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.27
SLC3A2-206ENST00000535296 PDS5BQ9NTI5 1447 aa29.15■■■□□ 2.26
SLC3A2-206ENST00000535296 WDR97A6NE52 1622 aa29.13■■■□□ 2.25
SLC3A2-206ENST00000535296 CUL7Q14999 1698 aa29.11■■■□□ 2.25
SLC3A2-206ENST00000535296 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
SLC3A2-206ENST00000535296 RRBP1Q9P2E9 1410 aaKnown RBP29.07■■■□□ 2.24
SLC3A2-206ENST00000535296 TIAM1Q13009 1591 aa29.04■■■□□ 2.24
SLC3A2-206ENST00000535296 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
SLC3A2-206ENST00000535296 P3H3Q8IVL6 736 aa29.02■■■□□ 2.24
SLC3A2-206ENST00000535296 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
SLC3A2-206ENST00000535296 MAP3K1Q13233 1512 aa29■■■□□ 2.23
SLC3A2-206ENST00000535296 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms