Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 MYC-209ENST00000641252 345 ntBASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TRBV23-1A0A0A0MS06 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV23-1A0A0A0MS06 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRBV23-1A0A0A0MS06 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV23-1A0A0A0MS06 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV23-1A0A0A0MS06 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms