Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 SRRM2-211ENST00000572883 887 ntTSL 28.18□□□□□ -1.14e-7■□□□□ 8.9
EWSR1Q01844 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.434e-7■□□□□ 8.9
EWSR1Q01844 AC132872.1-201ENST00000566986 1195 ntBASIC8.68□□□□□ -1.028e-8■□□□□ 8.9
EWSR1Q01844 PTBP1-215ENST00000589883 683 ntTSL 314.64□□□□□ -0.075e-8■□□□□ 8.9
EWSR1Q01844 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.393e-11■□□□□ 8.8
EWSR1Q01844 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.53e-11■□□□□ 8.8
EWSR1Q01844 HNRNPH3-207ENST00000480987 752 ntTSL 49.41□□□□□ -0.93e-11■□□□□ 8.8
EWSR1Q01844 HNRNPH3-205ENST00000469172 3356 ntTSL 28.44□□□□□ -1.063e-11■□□□□ 8.8
EWSR1Q01844 HNRNPH3-204ENST00000467249 566 ntTSL 26.48□□□□□ -1.373e-11■□□□□ 8.8
EWSR1Q01844 HNRNPH3-203ENST00000461310 648 ntTSL 56.01□□□□□ -1.453e-11■□□□□ 8.8
EWSR1Q01844 HNRNPH3-209ENST00000486854 635 ntTSL 24.56□□□□□ -1.683e-11■□□□□ 8.8
EWSR1Q01844 DGCR8-206ENST00000485802 555 ntTSL 510.43□□□□□ -0.742e-10■□□□□ 8.8
EWSR1Q01844 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.34e-7■□□□□ 8.7
EWSR1Q01844 MBD3-209ENST00000592012 2379 ntTSL 516.59■□□□□ 0.254e-7■□□□□ 8.7
EWSR1Q01844 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.14e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.144e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-206ENST00000466525 1720 ntTSL 513.05□□□□□ -0.324e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-210ENST00000496049 390 ntTSL 211.78□□□□□ -0.524e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.754e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-208ENST00000474249 1333 ntTSL 59.93□□□□□ -0.824e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-209ENST00000492719 930 ntTSL 39.9□□□□□ -0.824e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.864e-7■□□□□ 8.7
EWSR1Q01844 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.984e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC8.86□□□□□ -0.994e-7■□□□□ 8.7
EWSR1Q01844 GAPDH-207ENST00000466588 1363 ntTSL 58.66□□□□□ -1.024e-7■□□□□ 8.7
EWSR1Q01844 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.68e-7■□□□□ 8.6
EWSR1Q01844 HP1BP3-209ENST00000437575 473 ntTSL 318.56■□□□□ 0.561e-7■□□□□ 8.6
EWSR1Q01844 CHTF18-204ENST00000440239 1801 ntTSL 1 (best)17.52■□□□□ 0.41e-7■□□□□ 8.6
EWSR1Q01844 CHTF18-216ENST00000565787 607 ntTSL 517.33■□□□□ 0.361e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.288e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-208ENST00000598415 715 ntTSL 216.68■□□□□ 0.268e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-212ENST00000602075 763 ntTSL 316.68■□□□□ 0.268e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.218e-7■□□□□ 8.6
EWSR1Q01844 RAF1-203ENST00000423275 2354 ntTSL 215.99■□□□□ 0.158e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-203ENST00000593804 1586 ntTSL 215.94■□□□□ 0.148e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-210ENST00000600559 550 ntTSL 215.66■□□□□ 0.18e-7■□□□□ 8.6
EWSR1Q01844 HP1BP3-210ENST00000438032 1159 ntTSL 515.18■□□□□ 0.021e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.088e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-206ENST00000598090 463 ntTSL 314.56□□□□□ -0.088e-7■□□□□ 8.6
EWSR1Q01844 CHTF18-218ENST00000569270 711 ntTSL 514.31□□□□□ -0.121e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.06□□□□□ -0.168e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-211ENST00000601135 723 ntTSL 213.42□□□□□ -0.268e-7■□□□□ 8.6
EWSR1Q01844 HP1BP3-208ENST00000424732 970 ntTSL 313.36□□□□□ -0.271e-7■□□□□ 8.6
EWSR1Q01844 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.16□□□□□ -0.38e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-213ENST00000602201 556 ntTSL 412.95□□□□□ -0.348e-7■□□□□ 8.6
EWSR1Q01844 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.378e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-202ENST00000593561 546 ntTSL 412.65□□□□□ -0.388e-7■□□□□ 8.6
EWSR1Q01844 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.428e-7■□□□□ 8.6
EWSR1Q01844 DEDD2-207ENST00000598200 465 ntTSL 312.32□□□□□ -0.448e-7■□□□□ 8.6
EWSR1Q01844 CHTF18-217ENST00000567620 701 ntTSL 511.21□□□□□ -0.611e-7■□□□□ 8.6
EWSR1Q01844 RAF1-202ENST00000416093 962 ntTSL 211.16□□□□□ -0.628e-7■□□□□ 8.6
EWSR1Q01844 SQSTM1-208ENST00000485412 656 ntTSL 210.36□□□□□ -0.751e-7■□□□□ 8.6
EWSR1Q01844 AC107871.1-204ENST00000638026 2895 ntTSL 1 (best)10.22□□□□□ -0.778e-7■□□□□ 8.6
EWSR1Q01844 CNOT6L-208ENST00000515506 4024 ntTSL 57.9□□□□□ -1.158e-7■□□□□ 8.6
EWSR1Q01844 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.87■□□□□ 0.293e-7■□□□□ 8.6
EWSR1Q01844 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.223e-7■□□□□ 8.6
EWSR1Q01844 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.26□□□□□ -0.133e-7■□□□□ 8.6
EWSR1Q01844 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.66□□□□□ -0.223e-7■□□□□ 8.6
EWSR1Q01844 FOSL1-205ENST00000534222 584 ntTSL 39.95□□□□□ -0.823e-7■□□□□ 8.6
EWSR1Q01844 UBE2J2-212ENST00000467339 515 ntTSL 28.21□□□□□ -1.18e-9■□□□□ 8.5
EWSR1Q01844 AKT2-218ENST00000483166 4454 ntTSL 211.54□□□□□ -0.568e-8■□□□□ 8.5
EWSR1Q01844 AKT2-216ENST00000476266 3309 ntTSL 511.03□□□□□ -0.648e-8■□□□□ 8.5
EWSR1Q01844 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.677e-7■□□□□ 8.5
EWSR1Q01844 DCUN1D2-211ENST00000496873 499 ntTSL 316.03■□□□□ 0.167e-7■□□□□ 8.5
EWSR1Q01844 DCUN1D2-203ENST00000438545 1025 ntTSL 516.02■□□□□ 0.167e-7■□□□□ 8.5
EWSR1Q01844 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.97□□□□□ -0.337e-7■□□□□ 8.5
EWSR1Q01844 DCUN1D2-206ENST00000465710 460 ntTSL 39.57□□□□□ -0.887e-7■□□□□ 8.5
EWSR1Q01844 DCUN1D2-202ENST00000375403 3164 ntTSL 29.05□□□□□ -0.967e-7■□□□□ 8.5
EWSR1Q01844 DCUN1D2-204ENST00000439909 562 ntTSL 56.86□□□□□ -1.317e-7■□□□□ 8.5
EWSR1Q01844 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.261e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-204ENST00000474586 868 ntTSL 315.67■□□□□ 0.11e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.091e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.051e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.141e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-208ENST00000490942 862 ntTSL 1 (best)12.02□□□□□ -0.491e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-203ENST00000448549 582 ntTSL 411.56□□□□□ -0.561e-8■□□□□ 8.4
EWSR1Q01844 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)9.38□□□□□ -0.911e-8■□□□□ 8.4
EWSR1Q01844 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.563e-7■□□□□ 8.4
EWSR1Q01844 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.823e-7■□□□□ 8.4
EWSR1Q01844 PABPN1-206ENST00000556809 969 ntTSL 216.87■□□□□ 0.293e-7■□□□□ 8.4
EWSR1Q01844 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.57■□□□□ 0.243e-7■□□□□ 8.4
EWSR1Q01844 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.533e-7■□□□□ 8.4
EWSR1Q01844 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.873e-7■□□□□ 8.4
EWSR1Q01844 MFGE8-214ENST00000560937 801 ntTSL 213.95□□□□□ -0.182e-6■□□□□ 8.3
EWSR1Q01844 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-6■□□□□ 8.3
EWSR1Q01844 TMC6-214ENST00000590162 517 ntTSL 210.99□□□□□ -0.651e-19■□□□□ 8.3
EWSR1Q01844 LARP4B-205ENST00000448368 1438 ntTSL 417.62■□□□□ 0.411e-6■□□□□ 8.3
EWSR1Q01844 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.841e-6■□□□□ 8.3
EWSR1Q01844 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.781e-6■□□□□ 8.2
EWSR1Q01844 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.031e-6■□□□□ 8.2
EWSR1Q01844 ATAD3B-205ENST00000485748 3233 ntTSL 212.63□□□□□ -0.391e-6■□□□□ 8.2
EWSR1Q01844 ATAD3B-204ENST00000474481 3367 ntTSL 212.28□□□□□ -0.441e-6■□□□□ 8.2
EWSR1Q01844 ZNF276-206ENST00000563983 3403 ntTSL 210.66□□□□□ -0.71e-6■□□□□ 8.2
EWSR1Q01844 ATAD3B-203ENST00000472194 4314 ntTSL 1 (best)10.12□□□□□ -0.791e-6■□□□□ 8.2
EWSR1Q01844 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.784e-7■□□□□ 8
EWSR1Q01844 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.44■□□□□ 0.224e-7■□□□□ 8
EWSR1Q01844 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.7■□□□□ 0.14e-7■□□□□ 8
EWSR1Q01844 CAPZB-207ENST00000459967 579 ntTSL 312.77□□□□□ -0.374e-7■□□□□ 8
EWSR1Q01844 CAPZB-208ENST00000482808 660 ntTSL 211.53□□□□□ -0.564e-7■□□□□ 8
EWSR1Q01844 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.744e-7■□□□□ 8
Retrieved 100 of 7,101 protein–RNA pairs in 31.2 ms