RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 NISCHQ9Y2I1 1504 aa39.58■■■■□ 3.93
RAF1-203ENST00000423275 CCDC180Q9P1Z9 1646 aa33.76■■■■□ 3
RAF1-203ENST00000423275 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
RAF1-203ENST00000423275 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
RAF1-203ENST00000423275 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
RAF1-203ENST00000423275 SUPT5HO00267 1087 aaKnown RBP32.71■■■□□ 2.83
RAF1-203ENST00000423275 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
RAF1-203ENST00000423275 CHIC1Q5VXU3 224 aa31.7■■■□□ 2.67
RAF1-203ENST00000423275 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
RAF1-203ENST00000423275 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
RAF1-203ENST00000423275 ABCC9O60706 1549 aa31.51■■■□□ 2.64
RAF1-203ENST00000423275 NACADO15069 1562 aa31.28■■■□□ 2.6
RAF1-203ENST00000423275 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
RAF1-203ENST00000423275 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
RAF1-203ENST00000423275 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
RAF1-203ENST00000423275 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
RAF1-203ENST00000423275 LOC105371045A0A1W2PR82 267 aa30.76■■■□□ 2.51
RAF1-203ENST00000423275 WIZO95785 1651 aa30.58■■■□□ 2.49
RAF1-203ENST00000423275 PCGF6Q9BYE7 350 aa30.55■■■□□ 2.48
RAF1-203ENST00000423275 HRCP23327 699 aa30.49■■■□□ 2.47
RAF1-203ENST00000423275 TRIM41Q8WV44 630 aa30.48■■■□□ 2.47
RAF1-203ENST00000423275 UNC13AQ9UPW8 1703 aa30.41■■■□□ 2.46
RAF1-203ENST00000423275 BAZ1AQ9NRL2 1556 aaPredicted RBP30.4■■■□□ 2.46
RAF1-203ENST00000423275 FAM9AQ8IZU1 332 aaPredicted RBP30.23■■■□□ 2.43
RAF1-203ENST00000423275 SMARCA4P51532 1647 aa30.19■■■□□ 2.42
RAF1-203ENST00000423275 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
RAF1-203ENST00000423275 TOP2AP11388 1531 aaKnown RBP30.08■■■□□ 2.41
RAF1-203ENST00000423275 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
RAF1-203ENST00000423275 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
RAF1-203ENST00000423275 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
RAF1-203ENST00000423275 CCDC88BA6NC98 1476 aa29.97■■■□□ 2.39
RAF1-203ENST00000423275 TRIM26Q12899 539 aaPredicted RBP29.97■■■□□ 2.39
RAF1-203ENST00000423275 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
RAF1-203ENST00000423275 PPARGC1BQ86YN6 1023 aaKnown RBP29.9■■■□□ 2.38
RAF1-203ENST00000423275 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
RAF1-203ENST00000423275 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
RAF1-203ENST00000423275 ATAD2BQ9ULI0 1458 aa29.5■■■□□ 2.31
RAF1-203ENST00000423275 SOGA1O94964 1423 aa29.46■■■□□ 2.31
RAF1-203ENST00000423275 BAZ1BQ9UIG0 1483 aaKnown RBP29.37■■■□□ 2.29
RAF1-203ENST00000423275 RUSC2Q8N2Y8 1516 aa29.35■■■□□ 2.29
RAF1-203ENST00000423275 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
RAF1-203ENST00000423275 CSRNP3Q8WYN3 585 aa29.24■■■□□ 2.27
RAF1-203ENST00000423275 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
RAF1-203ENST00000423275 EEA1Q15075 1411 aa29.21■■■□□ 2.27
RAF1-203ENST00000423275 SYNJ1O43426 1573 aa29.2■■■□□ 2.26
RAF1-203ENST00000423275 CEP162Q5TB80 1403 aa29.17■■■□□ 2.26
RAF1-203ENST00000423275 TNIKQ9UKE5 1360 aa29.14■■■□□ 2.26
RAF1-203ENST00000423275 UBTFP17480 764 aaKnown RBP29.07■■■□□ 2.24
RAF1-203ENST00000423275 GOLGA3Q08378 1498 aa29.01■■■□□ 2.23
RAF1-203ENST00000423275 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
RAF1-203ENST00000423275 TTBK1Q5TCY1 1321 aaPredicted RBP28.93■■■□□ 2.22
RAF1-203ENST00000423275 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
RAF1-203ENST00000423275 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
RAF1-203ENST00000423275 KIF21BO75037 1637 aa28.86■■■□□ 2.21
RAF1-203ENST00000423275 TOP2BQ02880 1626 aa28.85■■■□□ 2.21
RAF1-203ENST00000423275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
RAF1-203ENST00000423275 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
RAF1-203ENST00000423275 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
RAF1-203ENST00000423275 RAPGEF2Q9Y4G8 1499 aa28.75■■■□□ 2.19
RAF1-203ENST00000423275 CCER1Q8TC90 406 aaPredicted RBP28.7■■■□□ 2.19
RAF1-203ENST00000423275 CLIP1P30622 1438 aa28.68■■■□□ 2.18
RAF1-203ENST00000423275 CFTRP13569 1480 aa28.66■■■□□ 2.18
RAF1-203ENST00000423275 CUX1P39880 1505 aa28.66■■■□□ 2.18
RAF1-203ENST00000423275 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
RAF1-203ENST00000423275 VPS8Q8N3P4 1428 aa28.52■■■□□ 2.16
RAF1-203ENST00000423275 PRXQ9BXM0 1461 aa28.51■■■□□ 2.15
RAF1-203ENST00000423275 ERICH3Q5RHP9 1530 aa28.44■■■□□ 2.14
RAF1-203ENST00000423275 KIF27Q86VH2 1401 aa28.41■■■□□ 2.14
RAF1-203ENST00000423275 PRDM2Q13029 1718 aa28.39■■■□□ 2.14
RAF1-203ENST00000423275 CC2D2AQ9P2K1 1620 aa28.39■■■□□ 2.14
RAF1-203ENST00000423275 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
RAF1-203ENST00000423275 APLP2Q06481 763 aa28.31■■■□□ 2.12
RAF1-203ENST00000423275 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
RAF1-203ENST00000423275 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
RAF1-203ENST00000423275 CUX2O14529 1486 aa28.21■■■□□ 2.11
RAF1-203ENST00000423275 IGF1RP08069 1367 aa28.18■■■□□ 2.1
RAF1-203ENST00000423275 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
RAF1-203ENST00000423275 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
RAF1-203ENST00000423275 KANK4Q5T7N3 995 aaPredicted RBP28.1■■■□□ 2.09
RAF1-203ENST00000423275 DIEXFQ68CQ4 756 aaKnown RBP28.09■■■□□ 2.09
RAF1-203ENST00000423275 ARHGAP35Q9NRY4 1499 aa28.09■■■□□ 2.09
RAF1-203ENST00000423275 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
RAF1-203ENST00000423275 NESP48681 1621 aa28.03■■■□□ 2.08
RAF1-203ENST00000423275 CARMIL1Q5VZK9 1371 aa28.02■■■□□ 2.08
RAF1-203ENST00000423275 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
RAF1-203ENST00000423275 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
RAF1-203ENST00000423275 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
RAF1-203ENST00000423275 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
RAF1-203ENST00000423275 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
RAF1-203ENST00000423275 ABCA10Q8WWZ4 1543 aa27.84■■■□□ 2.05
RAF1-203ENST00000423275 RRBP1Q9P2E9 1410 aaKnown RBP27.82■■■□□ 2.04
RAF1-203ENST00000423275 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
RAF1-203ENST00000423275 NEUROD1Q13562 356 aa27.8■■■□□ 2.04
RAF1-203ENST00000423275 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
RAF1-203ENST00000423275 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
RAF1-203ENST00000423275 P3H3Q8IVL6 736 aa27.73■■■□□ 2.03
RAF1-203ENST00000423275 CCNB3Q8WWL7 1395 aa27.71■■■□□ 2.03
RAF1-203ENST00000423275 TIAM1Q13009 1591 aa27.71■■■□□ 2.03
RAF1-203ENST00000423275 DHX57Q6P158 1386 aaKnown RBP27.7■■■□□ 2.03
RAF1-203ENST00000423275 MAP3K1Q13233 1512 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms