RNA–Protein interactions for RNA: ENST00000316157.7

LARP4B-201, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP4B, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-201ENST00000316157 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
LARP4B-201ENST00000316157 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
LARP4B-201ENST00000316157 ABCC9O60706 1549 aa19.45■□□□□ 0.7
LARP4B-201ENST00000316157 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
LARP4B-201ENST00000316157 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
LARP4B-201ENST00000316157 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.614e-8■■■■■ 28.7
LARP4B-201ENST00000316157 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
LARP4B-201ENST00000316157 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
LARP4B-201ENST00000316157 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
LARP4B-201ENST00000316157 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
LARP4B-201ENST00000316157 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
LARP4B-201ENST00000316157 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
LARP4B-201ENST00000316157 MYT1Q01538 1121 aa17.96■□□□□ 0.47
LARP4B-201ENST00000316157 NACADO15069 1562 aa17.94■□□□□ 0.46
LARP4B-201ENST00000316157 RANGAP1P46060 587 aaPredicted RBP17.93■□□□□ 0.46
LARP4B-201ENST00000316157 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
LARP4B-201ENST00000316157 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
LARP4B-201ENST00000316157 APLP2Q06481 763 aa17.85■□□□□ 0.45
LARP4B-201ENST00000316157 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
LARP4B-201ENST00000316157 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
LARP4B-201ENST00000316157 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.43
LARP4B-201ENST00000316157 FBLN2P98095 1184 aa17.74■□□□□ 0.43
LARP4B-201ENST00000316157 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
LARP4B-201ENST00000316157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
LARP4B-201ENST00000316157 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
LARP4B-201ENST00000316157 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
LARP4B-201ENST00000316157 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
LARP4B-201ENST00000316157 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
LARP4B-201ENST00000316157 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
LARP4B-201ENST00000316157 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
LARP4B-201ENST00000316157 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
LARP4B-201ENST00000316157 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
LARP4B-201ENST00000316157 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
LARP4B-201ENST00000316157 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
LARP4B-201ENST00000316157 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
LARP4B-201ENST00000316157 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
LARP4B-201ENST00000316157 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
LARP4B-201ENST00000316157 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
LARP4B-201ENST00000316157 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
LARP4B-201ENST00000316157 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
LARP4B-201ENST00000316157 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
LARP4B-201ENST00000316157 NEFLP07196 543 aa16.92■□□□□ 0.3
LARP4B-201ENST00000316157 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
LARP4B-201ENST00000316157 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
LARP4B-201ENST00000316157 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
LARP4B-201ENST00000316157 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
LARP4B-201ENST00000316157 ITGAEP38570 1179 aa16.8■□□□□ 0.28
LARP4B-201ENST00000316157 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
LARP4B-201ENST00000316157 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
LARP4B-201ENST00000316157 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
LARP4B-201ENST00000316157 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
LARP4B-201ENST00000316157 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
LARP4B-201ENST00000316157 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
LARP4B-201ENST00000316157 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
LARP4B-201ENST00000316157 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
LARP4B-201ENST00000316157 MROH2BQ7Z745 1585 aa16.73■□□□□ 0.27
LARP4B-201ENST00000316157 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
LARP4B-201ENST00000316157 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
LARP4B-201ENST00000316157 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
LARP4B-201ENST00000316157 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
LARP4B-201ENST00000316157 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
LARP4B-201ENST00000316157 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
LARP4B-201ENST00000316157 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.26
LARP4B-201ENST00000316157 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
LARP4B-201ENST00000316157 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.254e-7■■■□□ 16.7
LARP4B-201ENST00000316157 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
LARP4B-201ENST00000316157 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
LARP4B-201ENST00000316157 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
LARP4B-201ENST00000316157 BCANQ96GW7 911 aa16.54■□□□□ 0.24
LARP4B-201ENST00000316157 SOGA1O94964 1423 aa16.54■□□□□ 0.24
LARP4B-201ENST00000316157 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
LARP4B-201ENST00000316157 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
LARP4B-201ENST00000316157 KIF27Q86VH2 1401 aa16.52■□□□□ 0.24
LARP4B-201ENST00000316157 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
LARP4B-201ENST00000316157 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
LARP4B-201ENST00000316157 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
LARP4B-201ENST00000316157 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
LARP4B-201ENST00000316157 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
LARP4B-201ENST00000316157 WIZO95785 1651 aa16.47■□□□□ 0.23
LARP4B-201ENST00000316157 CUX2O14529 1486 aa16.46■□□□□ 0.23
LARP4B-201ENST00000316157 CYB5RLQ6IPT4 315 aa16.46■□□□□ 0.22
LARP4B-201ENST00000316157 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
LARP4B-201ENST00000316157 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
LARP4B-201ENST00000316157 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
LARP4B-201ENST00000316157 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
LARP4B-201ENST00000316157 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
LARP4B-201ENST00000316157 NESP48681 1621 aa16.34■□□□□ 0.21
LARP4B-201ENST00000316157 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
LARP4B-201ENST00000316157 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
LARP4B-201ENST00000316157 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
LARP4B-201ENST00000316157 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
LARP4B-201ENST00000316157 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
LARP4B-201ENST00000316157 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
LARP4B-201ENST00000316157 TSPY4P0CV99 314 aa16.24■□□□□ 0.19
LARP4B-201ENST00000316157 TSPY10P0CW01 314 aa16.24■□□□□ 0.19
LARP4B-201ENST00000316157 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
LARP4B-201ENST00000316157 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
LARP4B-201ENST00000316157 ZNF316A6NFI3 1004 aaPredicted RBP16.23■□□□□ 0.19
LARP4B-201ENST00000316157 POLR3GLQ9BT43 218 aa16.22■□□□□ 0.19
LARP4B-201ENST00000316157 EEA1Q15075 1411 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms