RNA–Protein interactions for RNA: ENST00000392524.6

HNRNPA3-201, Transcript of heterogeneous nuclear ribonucleoprotein A3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HNRNPA3, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA3-201ENST00000392524 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
HNRNPA3-201ENST00000392524 CCDC180Q9P1Z9 1646 aa28.49■■■□□ 2.15
HNRNPA3-201ENST00000392524 HRCP23327 699 aa27.95■■■□□ 2.06
HNRNPA3-201ENST00000392524 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
HNRNPA3-201ENST00000392524 PELP1Q8IZL8 1130 aaKnown RBP27.25■■□□□ 1.95
HNRNPA3-201ENST00000392524 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
HNRNPA3-201ENST00000392524 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
HNRNPA3-201ENST00000392524 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
HNRNPA3-201ENST00000392524 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
HNRNPA3-201ENST00000392524 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
HNRNPA3-201ENST00000392524 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
HNRNPA3-201ENST00000392524 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
HNRNPA3-201ENST00000392524 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
HNRNPA3-201ENST00000392524 ABCC9O60706 1549 aa26.8■■□□□ 1.88
HNRNPA3-201ENST00000392524 NACADO15069 1562 aa26.58■■□□□ 1.85
HNRNPA3-201ENST00000392524 TRIM26Q12899 539 aaPredicted RBP26.42■■□□□ 1.82
HNRNPA3-201ENST00000392524 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
HNRNPA3-201ENST00000392524 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
HNRNPA3-201ENST00000392524 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
HNRNPA3-201ENST00000392524 MYT1Q01538 1121 aa26.28■■□□□ 1.8
HNRNPA3-201ENST00000392524 LOC105371045A0A1W2PR82 267 aa26.11■■□□□ 1.77
HNRNPA3-201ENST00000392524 SCRIBQ14160 1630 aa26.04■■□□□ 1.76
HNRNPA3-201ENST00000392524 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
HNRNPA3-201ENST00000392524 NEUROD1Q13562 356 aa25.6■■□□□ 1.69
HNRNPA3-201ENST00000392524 UNC13AQ9UPW8 1703 aa25.56■■□□□ 1.68
HNRNPA3-201ENST00000392524 GTF3C3Q9Y5Q9 886 aa25.44■■□□□ 1.66
HNRNPA3-201ENST00000392524 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
HNRNPA3-201ENST00000392524 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
HNRNPA3-201ENST00000392524 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
HNRNPA3-201ENST00000392524 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
HNRNPA3-201ENST00000392524 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
HNRNPA3-201ENST00000392524 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
HNRNPA3-201ENST00000392524 DIEXFQ68CQ4 756 aaKnown RBP25.21■■□□□ 1.63
HNRNPA3-201ENST00000392524 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
HNRNPA3-201ENST00000392524 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
HNRNPA3-201ENST00000392524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
HNRNPA3-201ENST00000392524 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
HNRNPA3-201ENST00000392524 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
HNRNPA3-201ENST00000392524 FAM9AQ8IZU1 332 aaPredicted RBP24.92■■□□□ 1.58
HNRNPA3-201ENST00000392524 WIZO95785 1651 aa24.85■■□□□ 1.57
HNRNPA3-201ENST00000392524 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
HNRNPA3-201ENST00000392524 ZNF316A6NFI3 1004 aaPredicted RBP24.78■■□□□ 1.56
HNRNPA3-201ENST00000392524 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
HNRNPA3-201ENST00000392524 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
HNRNPA3-201ENST00000392524 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.555e-9■□□□□ 10.3
HNRNPA3-201ENST00000392524 SMARCA2P51531 1590 aa24.72■■□□□ 1.55
HNRNPA3-201ENST00000392524 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
HNRNPA3-201ENST00000392524 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
HNRNPA3-201ENST00000392524 EHMT2Q96KQ7 1210 aa24.59■■□□□ 1.53
HNRNPA3-201ENST00000392524 CLSPNQ9HAW4 1339 aa24.56■■□□□ 1.52
HNRNPA3-201ENST00000392524 YTHDC1Q96MU7 727 aaKnown RBP24.55■■□□□ 1.52
HNRNPA3-201ENST00000392524 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
HNRNPA3-201ENST00000392524 MIER1Q8N108 512 aa24.53■■□□□ 1.52
HNRNPA3-201ENST00000392524 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
HNRNPA3-201ENST00000392524 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
HNRNPA3-201ENST00000392524 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
HNRNPA3-201ENST00000392524 ANP32EQ9BTT0 268 aa24.36■■□□□ 1.49
HNRNPA3-201ENST00000392524 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
HNRNPA3-201ENST00000392524 BCL11AQ9H165 835 aa24.3■■□□□ 1.48
HNRNPA3-201ENST00000392524 SUPT16HQ9Y5B9 1047 aaKnown RBP24.3■■□□□ 1.48
HNRNPA3-201ENST00000392524 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
HNRNPA3-201ENST00000392524 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
HNRNPA3-201ENST00000392524 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
HNRNPA3-201ENST00000392524 TSHZ2Q9NRE2 1034 aa24.23■■□□□ 1.47
HNRNPA3-201ENST00000392524 EEA1Q15075 1411 aa24.09■■□□□ 1.45
HNRNPA3-201ENST00000392524 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
HNRNPA3-201ENST00000392524 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
HNRNPA3-201ENST00000392524 SOGA1O94964 1423 aa23.95■■□□□ 1.42
HNRNPA3-201ENST00000392524 CFTRP13569 1480 aa23.94■■□□□ 1.42
HNRNPA3-201ENST00000392524 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
HNRNPA3-201ENST00000392524 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
HNRNPA3-201ENST00000392524 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
HNRNPA3-201ENST00000392524 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
HNRNPA3-201ENST00000392524 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
HNRNPA3-201ENST00000392524 KIF21BO75037 1637 aa23.75■■□□□ 1.39
HNRNPA3-201ENST00000392524 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
HNRNPA3-201ENST00000392524 DHX57Q6P158 1386 aaKnown RBP23.74■■□□□ 1.39
HNRNPA3-201ENST00000392524 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
HNRNPA3-201ENST00000392524 CLIP1P30622 1438 aa23.7■■□□□ 1.38
HNRNPA3-201ENST00000392524 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
HNRNPA3-201ENST00000392524 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
HNRNPA3-201ENST00000392524 RBM19Q9Y4C8 960 aaKnown RBP23.62■■□□□ 1.37
HNRNPA3-201ENST00000392524 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
HNRNPA3-201ENST00000392524 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
HNRNPA3-201ENST00000392524 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.37
HNRNPA3-201ENST00000392524 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
HNRNPA3-201ENST00000392524 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
HNRNPA3-201ENST00000392524 CUX2O14529 1486 aa23.53■■□□□ 1.36
HNRNPA3-201ENST00000392524 FKBP8Q14318 412 aa23.52■■□□□ 1.35
HNRNPA3-201ENST00000392524 CUX1P39880 1505 aa23.5■■□□□ 1.35
HNRNPA3-201ENST00000392524 APLP2Q06481 763 aa23.48■■□□□ 1.35
HNRNPA3-201ENST00000392524 NESP48681 1621 aa23.48■■□□□ 1.35
HNRNPA3-201ENST00000392524 BCANQ96GW7 911 aa23.47■■□□□ 1.35
HNRNPA3-201ENST00000392524 KCNH8Q96L42 1107 aa23.47■■□□□ 1.35
HNRNPA3-201ENST00000392524 MSH5O43196 834 aa23.42■■□□□ 1.34
HNRNPA3-201ENST00000392524 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
HNRNPA3-201ENST00000392524 FANCIQ9NVI1 1328 aa23.4■■□□□ 1.34
HNRNPA3-201ENST00000392524 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
HNRNPA3-201ENST00000392524 NEFLP07196 543 aa23.36■■□□□ 1.33
HNRNPA3-201ENST00000392524 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms