RNA–Protein interactions for RNA: ENST00000485748.5

ATAD3B-205, Transcript of ATPase family, AAA domain containing 3B, humanhuman

TSL 2

Gene ATAD3B, Length 3,233 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-205ENST00000485748 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
ATAD3B-205ENST00000485748 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
ATAD3B-205ENST00000485748 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
ATAD3B-205ENST00000485748 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
ATAD3B-205ENST00000485748 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
ATAD3B-205ENST00000485748 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
ATAD3B-205ENST00000485748 ABCC9O60706 1549 aa26.31■■□□□ 1.8
ATAD3B-205ENST00000485748 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
ATAD3B-205ENST00000485748 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
ATAD3B-205ENST00000485748 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
ATAD3B-205ENST00000485748 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
ATAD3B-205ENST00000485748 NACADO15069 1562 aa25.53■■□□□ 1.68
ATAD3B-205ENST00000485748 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
ATAD3B-205ENST00000485748 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
ATAD3B-205ENST00000485748 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
ATAD3B-205ENST00000485748 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.639e-7■■■■■ 28.2
ATAD3B-205ENST00000485748 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
ATAD3B-205ENST00000485748 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
ATAD3B-205ENST00000485748 TRIM41Q8WV44 630 aa24.9■■□□□ 1.58
ATAD3B-205ENST00000485748 FAM9AQ8IZU1 332 aaPredicted RBP24.88■■□□□ 1.57
ATAD3B-205ENST00000485748 EHMT2Q96KQ7 1210 aa24.85■■□□□ 1.57
ATAD3B-205ENST00000485748 WIZO95785 1651 aa24.82■■□□□ 1.56
ATAD3B-205ENST00000485748 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.55
ATAD3B-205ENST00000485748 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
ATAD3B-205ENST00000485748 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
ATAD3B-205ENST00000485748 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
ATAD3B-205ENST00000485748 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
ATAD3B-205ENST00000485748 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
ATAD3B-205ENST00000485748 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
ATAD3B-205ENST00000485748 SMARCA2P51531 1590 aa24.21■■□□□ 1.47
ATAD3B-205ENST00000485748 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
ATAD3B-205ENST00000485748 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
ATAD3B-205ENST00000485748 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
ATAD3B-205ENST00000485748 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
ATAD3B-205ENST00000485748 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
ATAD3B-205ENST00000485748 HRCP23327 699 aa23.95■■□□□ 1.42
ATAD3B-205ENST00000485748 SOGA1O94964 1423 aa23.94■■□□□ 1.42
ATAD3B-205ENST00000485748 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
ATAD3B-205ENST00000485748 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
ATAD3B-205ENST00000485748 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
ATAD3B-205ENST00000485748 TRIM26Q12899 539 aaPredicted RBP23.86■■□□□ 1.41
ATAD3B-205ENST00000485748 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
ATAD3B-205ENST00000485748 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
ATAD3B-205ENST00000485748 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.4
ATAD3B-205ENST00000485748 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
ATAD3B-205ENST00000485748 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
ATAD3B-205ENST00000485748 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
ATAD3B-205ENST00000485748 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
ATAD3B-205ENST00000485748 CEP162Q5TB80 1403 aa23.52■■□□□ 1.36
ATAD3B-205ENST00000485748 EEA1Q15075 1411 aa23.5■■□□□ 1.35
ATAD3B-205ENST00000485748 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.35
ATAD3B-205ENST00000485748 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
ATAD3B-205ENST00000485748 GOLGA3Q08378 1498 aa23.41■■□□□ 1.34
ATAD3B-205ENST00000485748 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
ATAD3B-205ENST00000485748 CFTRP13569 1480 aa23.4■■□□□ 1.34
ATAD3B-205ENST00000485748 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
ATAD3B-205ENST00000485748 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
ATAD3B-205ENST00000485748 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
ATAD3B-205ENST00000485748 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
ATAD3B-205ENST00000485748 CUX1P39880 1505 aa23.3■■□□□ 1.32
ATAD3B-205ENST00000485748 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
ATAD3B-205ENST00000485748 CLIP1P30622 1438 aa23.24■■□□□ 1.31
ATAD3B-205ENST00000485748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.23■■□□□ 1.31
ATAD3B-205ENST00000485748 APLP2Q06481 763 aa23.21■■□□□ 1.31
ATAD3B-205ENST00000485748 NESP48681 1621 aa23.21■■□□□ 1.31
ATAD3B-205ENST00000485748 KIF27Q86VH2 1401 aa23.18■■□□□ 1.3
ATAD3B-205ENST00000485748 CUX2O14529 1486 aa23.13■■□□□ 1.29
ATAD3B-205ENST00000485748 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
ATAD3B-205ENST00000485748 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
ATAD3B-205ENST00000485748 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
ATAD3B-205ENST00000485748 KIF21BO75037 1637 aa23.09■■□□□ 1.29
ATAD3B-205ENST00000485748 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
ATAD3B-205ENST00000485748 FGD5Q6ZNL6 1462 aa23.05■■□□□ 1.28
ATAD3B-205ENST00000485748 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
ATAD3B-205ENST00000485748 ZEB1P37275 1124 aaPredicted RBP23.01■■□□□ 1.27
ATAD3B-205ENST00000485748 IGF1RP08069 1367 aa23■■□□□ 1.27
ATAD3B-205ENST00000485748 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
ATAD3B-205ENST00000485748 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
ATAD3B-205ENST00000485748 VPS8Q8N3P4 1428 aa22.96■■□□□ 1.27
ATAD3B-205ENST00000485748 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
ATAD3B-205ENST00000485748 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
ATAD3B-205ENST00000485748 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
ATAD3B-205ENST00000485748 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
ATAD3B-205ENST00000485748 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
ATAD3B-205ENST00000485748 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
ATAD3B-205ENST00000485748 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
ATAD3B-205ENST00000485748 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
ATAD3B-205ENST00000485748 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
ATAD3B-205ENST00000485748 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
ATAD3B-205ENST00000485748 ITGAEP38570 1179 aa22.77■■□□□ 1.24
ATAD3B-205ENST00000485748 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
ATAD3B-205ENST00000485748 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
ATAD3B-205ENST00000485748 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
ATAD3B-205ENST00000485748 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
ATAD3B-205ENST00000485748 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
ATAD3B-205ENST00000485748 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
ATAD3B-205ENST00000485748 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
ATAD3B-205ENST00000485748 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
ATAD3B-205ENST00000485748 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
ATAD3B-205ENST00000485748 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.24e-7■■■■■ 37.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms