RNA–Protein interactions for RNA: ENST00000448368.5

LARP4B-205, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 4

Gene LARP4B, Length 1,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-205ENST00000448368 NISCHQ9Y2I1 1504 aa51.1■■■■■ 5.77
LARP4B-205ENST00000448368 CCDC180Q9P1Z9 1646 aa44.87■■■■■ 4.77
LARP4B-205ENST00000448368 ABCC9O60706 1549 aa43.6■■■■■ 4.57
LARP4B-205ENST00000448368 ZCCHC6Q5VYS8 1495 aaKnown RBP42.86■■■■■ 4.45
LARP4B-205ENST00000448368 DCAF1Q9Y4B6 1507 aa42.37■■■■■ 4.37
LARP4B-205ENST00000448368 DCAF8L2P0C7V8 631 aa42.15■■■■■ 4.34
LARP4B-205ENST00000448368 MYO15BQ96JP2 1530 aa42.06■■■■■ 4.32
LARP4B-205ENST00000448368 NACADO15069 1562 aa41.89■■■■■ 4.3
LARP4B-205ENST00000448368 RB1CC1Q8TDY2 1594 aa41.61■■■■■ 4.25
LARP4B-205ENST00000448368 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
LARP4B-205ENST00000448368 DNAJC5BQ9UF47 199 aa41.06■■■■■ 4.16
LARP4B-205ENST00000448368 SCRIBQ14160 1630 aa41.04■■■■■ 4.16
LARP4B-205ENST00000448368 UNC13AQ9UPW8 1703 aa40.67■■■■■ 4.1
LARP4B-205ENST00000448368 PABPN1Q86U42 306 aaKnown RBP eCLIP40.5■■■■■ 4.07
LARP4B-205ENST00000448368 BICRAQ9NZM4 1560 aa40.32■■■■■ 4.04
LARP4B-205ENST00000448368 CECR2Q9BXF3 1484 aa39.64■■■■□ 3.94
LARP4B-205ENST00000448368 BAZ1AQ9NRL2 1556 aaPredicted RBP39.54■■■■□ 3.92
LARP4B-205ENST00000448368 RSF1Q96T23 1441 aaPredicted RBP39.42■■■■□ 3.9
LARP4B-205ENST00000448368 CC2D2AQ9P2K1 1620 aa39.4■■■■□ 3.9
LARP4B-205ENST00000448368 SUPT5HO00267 1087 aaKnown RBP39.4■■■■□ 3.9
LARP4B-205ENST00000448368 MROH2BQ7Z745 1585 aa39.4■■■■□ 3.9
LARP4B-205ENST00000448368 SMARCA4P51532 1647 aa39.38■■■■□ 3.9
LARP4B-205ENST00000448368 EIF4G1Q04637 1599 aaKnown RBP39.26■■■■□ 3.88
LARP4B-205ENST00000448368 WIZO95785 1651 aa39.03■■■■□ 3.84
LARP4B-205ENST00000448368 PEG3Q9GZU2 1588 aa38.98■■■■□ 3.83
LARP4B-205ENST00000448368 SMARCA2P51531 1590 aa38.87■■■■□ 3.81
LARP4B-205ENST00000448368 ATAD2BQ9ULI0 1458 aa38.83■■■■□ 3.81
LARP4B-205ENST00000448368 TOP2AP11388 1531 aaKnown RBP38.73■■■■□ 3.79
LARP4B-205ENST00000448368 NCAPD3P42695 1498 aa38.62■■■■□ 3.77
LARP4B-205ENST00000448368 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
LARP4B-205ENST00000448368 HMGXB3Q12766 1538 aa38.57■■■■□ 3.76
LARP4B-205ENST00000448368 CCDC88BA6NC98 1476 aa38.25■■■■□ 3.71
LARP4B-205ENST00000448368 DNAJC5Q9H3Z4 198 aa37.69■■■■□ 3.62
LARP4B-205ENST00000448368 CFTRP13569 1480 aa37.62■■■■□ 3.61
LARP4B-205ENST00000448368 CADPSQ9ULU8 1353 aa37.57■■■■□ 3.6
LARP4B-205ENST00000448368 CUX2O14529 1486 aa37.55■■■■□ 3.6
LARP4B-205ENST00000448368 ERCC6Q03468 1493 aa37.55■■■■□ 3.6
LARP4B-205ENST00000448368 CHIC1Q5VXU3 224 aa37.54■■■■□ 3.6
LARP4B-205ENST00000448368 NESP48681 1621 aa37.46■■■■□ 3.59
LARP4B-205ENST00000448368 PRDM2Q13029 1718 aa37.44■■■■□ 3.58
LARP4B-205ENST00000448368 LAMC3Q9Y6N6 1575 aa37.41■■■■□ 3.58
LARP4B-205ENST00000448368 ABCC8Q09428 1581 aa37.24■■■■□ 3.55
LARP4B-205ENST00000448368 TRIM41Q8WV44 630 aa37.17■■■■□ 3.54
LARP4B-205ENST00000448368 WRNQ14191 1432 aaPredicted RBP eCLIP37.15■■■■□ 3.544e-7■■■□□ 16.7
LARP4B-205ENST00000448368 THOC2Q8NI27 1593 aaKnown RBP37.14■■■■□ 3.54
LARP4B-205ENST00000448368 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.53
LARP4B-205ENST00000448368 PDS5BQ9NTI5 1447 aa37.11■■■■□ 3.53
LARP4B-205ENST00000448368 KIF21AQ7Z4S6 1674 aa37.02■■■■□ 3.52
LARP4B-205ENST00000448368 CEP164Q9UPV0 1460 aa36.98■■■■□ 3.51
LARP4B-205ENST00000448368 SYNJ1O43426 1573 aa36.98■■■■□ 3.51
LARP4B-205ENST00000448368 TOP2BQ02880 1626 aa36.93■■■■□ 3.5
LARP4B-205ENST00000448368 BIVM-ERCC5R4GMW8 1640 aa36.92■■■■□ 3.5
LARP4B-205ENST00000448368 CUX1P39880 1505 aa36.89■■■■□ 3.5
LARP4B-205ENST00000448368 DNMBPQ6XZF7 1577 aa36.77■■■■□ 3.48
LARP4B-205ENST00000448368 TOPBP1Q92547 1522 aa36.68■■■■□ 3.46
LARP4B-205ENST00000448368 URB2Q14146 1524 aaKnown RBP36.67■■■■□ 3.46
LARP4B-205ENST00000448368 MRC2Q9UBG0 1479 aa36.65■■■■□ 3.46
LARP4B-205ENST00000448368 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.44
LARP4B-205ENST00000448368 WDR62O43379 1518 aa36.52■■■■□ 3.44
LARP4B-205ENST00000448368 EEA1Q15075 1411 aa36.49■■■■□ 3.43
LARP4B-205ENST00000448368 POLA1P09884 1462 aaPredicted RBP36.47■■■■□ 3.43
LARP4B-205ENST00000448368 SOGA1O94964 1423 aa36.45■■■■□ 3.43
LARP4B-205ENST00000448368 FAM9AQ8IZU1 332 aaPredicted RBP36.34■■■■□ 3.41
LARP4B-205ENST00000448368 RUSC2Q8N2Y8 1516 aa36.3■■■■□ 3.4
LARP4B-205ENST00000448368 KIF27Q86VH2 1401 aa36.29■■■■□ 3.4
LARP4B-205ENST00000448368 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
LARP4B-205ENST00000448368 RAD54L2Q9Y4B4 1467 aa36.27■■■■□ 3.4
LARP4B-205ENST00000448368 WDR97A6NE52 1622 aa36.2■■■■□ 3.39
LARP4B-205ENST00000448368 CSRNP3Q8WYN3 585 aa36.19■■■■□ 3.38
LARP4B-205ENST00000448368 TARBP1Q13395 1621 aaKnown RBP36.18■■■■□ 3.38
LARP4B-205ENST00000448368 IFT140Q96RY7 1462 aa36.15■■■■□ 3.38
LARP4B-205ENST00000448368 ABCA5Q8WWZ7 1642 aa36.02■■■■□ 3.36
LARP4B-205ENST00000448368 KIF21BO75037 1637 aa35.99■■■■□ 3.35
LARP4B-205ENST00000448368 LOC105371045A0A1W2PR82 267 aa35.98■■■■□ 3.35
LARP4B-205ENST00000448368 TDRD9Q8NDG6 1382 aaKnown RBP35.95■■■■□ 3.35
LARP4B-205ENST00000448368 GAPVD1Q14C86 1478 aa35.95■■■■□ 3.35
LARP4B-205ENST00000448368 IGF1RP08069 1367 aa35.94■■■■□ 3.34
LARP4B-205ENST00000448368 PRXQ9BXM0 1461 aa35.9■■■■□ 3.34
LARP4B-205ENST00000448368 GOLGA3Q08378 1498 aa35.89■■■■□ 3.34
LARP4B-205ENST00000448368 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.34
LARP4B-205ENST00000448368 ZNF608Q9ULD9 1512 aaPredicted RBP35.83■■■■□ 3.33
LARP4B-205ENST00000448368 CUL7Q14999 1698 aa35.81■■■■□ 3.32
LARP4B-205ENST00000448368 AQRO60306 1485 aaKnown RBP eCLIP35.81■■■■□ 3.322e-8■■■■■ 40.2
LARP4B-205ENST00000448368 CARMIL1Q5VZK9 1371 aa35.78■■■■□ 3.32
LARP4B-205ENST00000448368 PBRM1Q86U86 1689 aa35.78■■■■□ 3.32
LARP4B-205ENST00000448368 EIF4G3O43432 1585 aaKnown RBP35.78■■■■□ 3.32
LARP4B-205ENST00000448368 GRIN2BQ13224 1484 aa35.77■■■■□ 3.32
LARP4B-205ENST00000448368 RAPGEF2Q9Y4G8 1499 aa35.76■■■■□ 3.32
LARP4B-205ENST00000448368 EHMT2Q96KQ7 1210 aa35.75■■■■□ 3.31
LARP4B-205ENST00000448368 OSCARQ8IYS5 282 aa35.72■■■■□ 3.31
LARP4B-205ENST00000448368 TNIKQ9UKE5 1360 aa35.68■■■■□ 3.3
LARP4B-205ENST00000448368 UBTFP17480 764 aaKnown RBP35.65■■■■□ 3.3
LARP4B-205ENST00000448368 ADAMTS12P58397 1594 aa35.59■■■■□ 3.29
LARP4B-205ENST00000448368 FHAD1B1AJZ9 1412 aa35.58■■■■□ 3.29
LARP4B-205ENST00000448368 MAGI1Q96QZ7 1491 aaPredicted RBP35.55■■■■□ 3.28
LARP4B-205ENST00000448368 SNAPC4Q5SXM2 1469 aa35.54■■■■□ 3.28
LARP4B-205ENST00000448368 RIMBP3CA6NJZ7 1639 aa35.49■■■■□ 3.27
LARP4B-205ENST00000448368 RIMBP3BA6NNM3 1639 aa35.49■■■■□ 3.27
LARP4B-205ENST00000448368 RIMBP3Q9UFD9 1639 aa35.49■■■■□ 3.27
LARP4B-205ENST00000448368 CEP162Q5TB80 1403 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms