Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SCML2Q9UQR0 LINC00273-201ENST00000539813 1452 ntBASIC27.28■■□□□ 1.96
SCML2Q9UQR0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SCML2Q9UQR0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCML2Q9UQR0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SCML2Q9UQR0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCML2Q9UQR0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCML2Q9UQR0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
SCML2Q9UQR0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.24■■□□□ 1.95
SCML2Q9UQR0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.24■■□□□ 1.95
SCML2Q9UQR0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SCML2Q9UQR0 DUX4L11-201ENST00000611504 1267 ntBASIC27.23■■□□□ 1.95
SCML2Q9UQR0 DUX4L12-201ENST00000614593 1267 ntBASIC27.23■■□□□ 1.95
SCML2Q9UQR0 DUX4L14-201ENST00000621227 1267 ntBASIC27.23■■□□□ 1.95
SCML2Q9UQR0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCML2Q9UQR0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SCML2Q9UQR0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.23■■□□□ 1.95
SCML2Q9UQR0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCML2Q9UQR0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SCML2Q9UQR0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.21■■□□□ 1.95
SCML2Q9UQR0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.2■■□□□ 1.94
SCML2Q9UQR0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SCML2Q9UQR0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCML2Q9UQR0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
SCML2Q9UQR0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCML2Q9UQR0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCML2Q9UQR0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCML2Q9UQR0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.15■■□□□ 1.94
SCML2Q9UQR0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.15■■□□□ 1.94
SCML2Q9UQR0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.15■■□□□ 1.94
SCML2Q9UQR0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCML2Q9UQR0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.14■■□□□ 1.94
SCML2Q9UQR0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCML2Q9UQR0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.13■■□□□ 1.93
SCML2Q9UQR0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCML2Q9UQR0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCML2Q9UQR0 DUX4L13-201ENST00000554103 1267 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 MIR3648-2-201ENST00000581792 180 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L15-201ENST00000611059 1267 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L23-201ENST00000615195 1269 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 MIR3648-1-201ENST00000615959 180 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L24-201ENST00000617576 1269 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L22-201ENST00000618238 1269 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L20-201ENST00000619712 1269 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L21-201ENST00000622058 1269 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L10-201ENST00000622460 1267 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 DUX4L25-201ENST00000624915 1269 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCML2Q9UQR0 AC135983.2-203ENST00000454486 1613 ntBASIC27.12■■□□□ 1.93
SCML2Q9UQR0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.11■■□□□ 1.93
SCML2Q9UQR0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
SCML2Q9UQR0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.1■■□□□ 1.93
SCML2Q9UQR0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.1■■□□□ 1.93
SCML2Q9UQR0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.09■■□□□ 1.93
SCML2Q9UQR0 CR559946.2-201ENST00000623684 991 ntBASIC27.09■■□□□ 1.93
SCML2Q9UQR0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SCML2Q9UQR0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCML2Q9UQR0 HLA-V-202ENST00000446817 847 ntBASIC27.08■■□□□ 1.93
SCML2Q9UQR0 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.08■■□□□ 1.93
SCML2Q9UQR0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SCML2Q9UQR0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
SCML2Q9UQR0 WHAMMP2-203ENST00000563942 1603 ntBASIC27.07■■□□□ 1.92
SCML2Q9UQR0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
SCML2Q9UQR0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SCML2Q9UQR0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.06■■□□□ 1.92
SCML2Q9UQR0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SCML2Q9UQR0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.06■■□□□ 1.92
SCML2Q9UQR0 AC016575.1-201ENST00000607026 382 ntBASIC27.06■■□□□ 1.92
SCML2Q9UQR0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SCML2Q9UQR0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SCML2Q9UQR0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SCML2Q9UQR0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.04■■□□□ 1.92
SCML2Q9UQR0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCML2Q9UQR0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCML2Q9UQR0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCML2Q9UQR0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SCML2Q9UQR0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCML2Q9UQR0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SCML2Q9UQR0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
SCML2Q9UQR0 ABCB10P1-201ENST00000614297 2181 ntBASIC27.03■■□□□ 1.92
SCML2Q9UQR0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
SCML2Q9UQR0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCML2Q9UQR0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.02■■□□□ 1.92
SCML2Q9UQR0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.02■■□□□ 1.92
SCML2Q9UQR0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
SCML2Q9UQR0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SCML2Q9UQR0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms