Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.51■■■■□ 3.12
SPG7Q9UQ90 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.51■■■■□ 3.12
SPG7Q9UQ90 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
SPG7Q9UQ90 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 CHST11-202ENST00000546689 756 ntTSL 2 BASIC34.48■■■■□ 3.11
SPG7Q9UQ90 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.48■■■■□ 3.11
SPG7Q9UQ90 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
SPG7Q9UQ90 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SPG7Q9UQ90 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SPG7Q9UQ90 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
SPG7Q9UQ90 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.44■■■■□ 3.1
SPG7Q9UQ90 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.44■■■■□ 3.1
SPG7Q9UQ90 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
SPG7Q9UQ90 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
SPG7Q9UQ90 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
SPG7Q9UQ90 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
SPG7Q9UQ90 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC34.42■■■■□ 3.1
SPG7Q9UQ90 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC34.4■■■■□ 3.1
SPG7Q9UQ90 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
SPG7Q9UQ90 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SPG7Q9UQ90 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPG7Q9UQ90 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
SPG7Q9UQ90 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC34.35■■■■□ 3.09
SPG7Q9UQ90 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SPG7Q9UQ90 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SPG7Q9UQ90 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SPG7Q9UQ90 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
SPG7Q9UQ90 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SPG7Q9UQ90 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
SPG7Q9UQ90 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SPG7Q9UQ90 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC34.29■■■■□ 3.08
SPG7Q9UQ90 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SPG7Q9UQ90 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
SPG7Q9UQ90 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SPG7Q9UQ90 RARRES2P2-201ENST00000394842 485 ntBASIC34.24■■■■□ 3.07
SPG7Q9UQ90 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SPG7Q9UQ90 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SPG7Q9UQ90 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
SPG7Q9UQ90 GPX1-201ENST00000419349 1106 ntBASIC34.23■■■■□ 3.07
SPG7Q9UQ90 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SPG7Q9UQ90 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
SPG7Q9UQ90 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
SPG7Q9UQ90 AC127502.1-201ENST00000399971 1502 ntBASIC34.21■■■■□ 3.07
SPG7Q9UQ90 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC34.21■■■■□ 3.07
SPG7Q9UQ90 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
SPG7Q9UQ90 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.18■■■■□ 3.06
SPG7Q9UQ90 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
SPG7Q9UQ90 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.18■■■■□ 3.06
SPG7Q9UQ90 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
SPG7Q9UQ90 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC34.17■■■■□ 3.06
SPG7Q9UQ90 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.15■■■■□ 3.06
SPG7Q9UQ90 RNF126P1-201ENST00000567452 1320 ntBASIC34.14■■■■□ 3.06
SPG7Q9UQ90 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
SPG7Q9UQ90 AC135983.2-203ENST00000454486 1613 ntBASIC34.14■■■■□ 3.06
SPG7Q9UQ90 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
SPG7Q9UQ90 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.13■■■■□ 3.05
SPG7Q9UQ90 CEP120-209ENST00000515110 606 ntTSL 3 BASIC34.12■■■■□ 3.05
SPG7Q9UQ90 AC008813.1-201ENST00000536597 885 ntBASIC34.12■■■■□ 3.05
SPG7Q9UQ90 ABHD17AP5-201ENST00000580133 923 ntBASIC34.11■■■■□ 3.05
SPG7Q9UQ90 WHAMMP2-203ENST00000563942 1603 ntBASIC34.11■■■■□ 3.05
SPG7Q9UQ90 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
SPG7Q9UQ90 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
SPG7Q9UQ90 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
SPG7Q9UQ90 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
SPG7Q9UQ90 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
SPG7Q9UQ90 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.08■■■■□ 3.05
SPG7Q9UQ90 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.08■■■■□ 3.05
SPG7Q9UQ90 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC34.07■■■■□ 3.04
SPG7Q9UQ90 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.07■■■■□ 3.04
SPG7Q9UQ90 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.07■■■■□ 3.04
SPG7Q9UQ90 AL135925.1-201ENST00000605920 1701 ntBASIC34.05■■■■□ 3.04
SPG7Q9UQ90 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC34.05■■■■□ 3.04
SPG7Q9UQ90 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms