Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
MACF1Q9UPN3 OR2A1-AS1-204ENST00000470435 602 ntBASIC11.25□□□□□ -0.61
MACF1Q9UPN3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MACF1Q9UPN3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MACF1Q9UPN3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MACF1Q9UPN3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MACF1Q9UPN3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC11.24□□□□□ -0.61
MACF1Q9UPN3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC11.24□□□□□ -0.61
MACF1Q9UPN3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MACF1Q9UPN3 AL356441.2-201ENST00000443009 864 ntBASIC11.24□□□□□ -0.61
MACF1Q9UPN3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 HES6-204ENST00000409182 863 ntTSL 2 BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 WASH5P-204ENST00000632292 975 ntBASIC11.23□□□□□ -0.61
MACF1Q9UPN3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MACF1Q9UPN3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC11.22□□□□□ -0.61
MACF1Q9UPN3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC11.22□□□□□ -0.61
MACF1Q9UPN3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MACF1Q9UPN3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC11.22□□□□□ -0.61
MACF1Q9UPN3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MACF1Q9UPN3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
MACF1Q9UPN3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
MACF1Q9UPN3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC11.21□□□□□ -0.61
MACF1Q9UPN3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MACF1Q9UPN3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
MACF1Q9UPN3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC11.21□□□□□ -0.62
MACF1Q9UPN3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC11.21□□□□□ -0.62
MACF1Q9UPN3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
MACF1Q9UPN3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC11.2□□□□□ -0.62
MACF1Q9UPN3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MACF1Q9UPN3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MACF1Q9UPN3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
MACF1Q9UPN3 GUSBP5-201ENST00000418136 578 ntBASIC11.2□□□□□ -0.62
MACF1Q9UPN3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC11.19□□□□□ -0.62
MACF1Q9UPN3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MACF1Q9UPN3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
MACF1Q9UPN3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MACF1Q9UPN3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC11.19□□□□□ -0.62
MACF1Q9UPN3 AC008406.3-201ENST00000620001 1374 ntBASIC11.19□□□□□ -0.62
MACF1Q9UPN3 RP9P-202ENST00000450133 1212 ntBASIC11.19□□□□□ -0.62
MACF1Q9UPN3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
MACF1Q9UPN3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MACF1Q9UPN3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC11.17□□□□□ -0.62
MACF1Q9UPN3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC11.17□□□□□ -0.62
MACF1Q9UPN3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC11.17□□□□□ -0.62
MACF1Q9UPN3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC11.17□□□□□ -0.62
MACF1Q9UPN3 SPCS2P3-201ENST00000500401 656 ntBASIC11.16□□□□□ -0.62
MACF1Q9UPN3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MACF1Q9UPN3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MACF1Q9UPN3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC11.15□□□□□ -0.62
MACF1Q9UPN3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MACF1Q9UPN3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
MACF1Q9UPN3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC11.15□□□□□ -0.62
MACF1Q9UPN3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC11.15□□□□□ -0.62
MACF1Q9UPN3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
MACF1Q9UPN3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MACF1Q9UPN3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
MACF1Q9UPN3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
MACF1Q9UPN3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MACF1Q9UPN3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MACF1Q9UPN3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
MACF1Q9UPN3 RARRES2P6-201ENST00000567333 442 ntBASIC11.13□□□□□ -0.63
MACF1Q9UPN3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC11.13□□□□□ -0.63
MACF1Q9UPN3 RALB-208ENST00000631312 311 ntTSL 5 BASIC11.13□□□□□ -0.63
MACF1Q9UPN3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC11.12□□□□□ -0.63
MACF1Q9UPN3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
MACF1Q9UPN3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
MACF1Q9UPN3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC11.12□□□□□ -0.63
MACF1Q9UPN3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MACF1Q9UPN3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MACF1Q9UPN3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MACF1Q9UPN3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC11.1□□□□□ -0.63
MACF1Q9UPN3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC11.1□□□□□ -0.63
MACF1Q9UPN3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MACF1Q9UPN3 AC104564.3-201ENST00000582367 638 ntBASIC11.1□□□□□ -0.63
MACF1Q9UPN3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MACF1Q9UPN3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MACF1Q9UPN3 KRT8P33-201ENST00000508125 1423 ntBASIC11.09□□□□□ -0.63
MACF1Q9UPN3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MACF1Q9UPN3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
MACF1Q9UPN3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MACF1Q9UPN3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms