Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
PCDHGB4Q9UN71 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB4Q9UN71 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGB4Q9UN71 AL121749.1-202ENST00000609313 2153 ntBASIC24.86■■□□□ 1.57
PCDHGB4Q9UN71 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB4Q9UN71 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB4Q9UN71 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB4Q9UN71 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHGB4Q9UN71 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGB4Q9UN71 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGB4Q9UN71 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHGB4Q9UN71 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHGB4Q9UN71 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGB4Q9UN71 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
PCDHGB4Q9UN71 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGB4Q9UN71 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGB4Q9UN71 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGB4Q9UN71 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGB4Q9UN71 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGB4Q9UN71 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGB4Q9UN71 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGB4Q9UN71 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHGB4Q9UN71 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB4Q9UN71 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB4Q9UN71 AC010864.1-201ENST00000609407 1511 ntBASIC24.78■■□□□ 1.56
PCDHGB4Q9UN71 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB4Q9UN71 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PCDHGB4Q9UN71 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
PCDHGB4Q9UN71 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHGB4Q9UN71 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDHGB4Q9UN71 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGB4Q9UN71 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDHGB4Q9UN71 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDHGB4Q9UN71 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB4Q9UN71 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB4Q9UN71 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHGB4Q9UN71 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB4Q9UN71 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB4Q9UN71 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB4Q9UN71 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB4Q9UN71 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB4Q9UN71 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB4Q9UN71 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB4Q9UN71 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.72■■□□□ 1.55
PCDHGB4Q9UN71 AL139393.2-201ENST00000608721 2025 ntBASIC24.72■■□□□ 1.55
PCDHGB4Q9UN71 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB4Q9UN71 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHGB4Q9UN71 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB4Q9UN71 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHGB4Q9UN71 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
PCDHGB4Q9UN71 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHGB4Q9UN71 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB4Q9UN71 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB4Q9UN71 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHGB4Q9UN71 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGB4Q9UN71 AL391121.1-201ENST00000607967 1349 ntBASIC24.68■■□□□ 1.54
PCDHGB4Q9UN71 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PCDHGB4Q9UN71 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGB4Q9UN71 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGB4Q9UN71 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHGB4Q9UN71 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGB4Q9UN71 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGB4Q9UN71 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGB4Q9UN71 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHGB4Q9UN71 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGB4Q9UN71 AC097358.2-201ENST00000607541 1159 ntBASIC24.66■■□□□ 1.54
PCDHGB4Q9UN71 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGB4Q9UN71 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGB4Q9UN71 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.65■■□□□ 1.54
PCDHGB4Q9UN71 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGB4Q9UN71 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGB4Q9UN71 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
PCDHGB4Q9UN71 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHGB4Q9UN71 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PCDHGB4Q9UN71 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGB4Q9UN71 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
PCDHGB4Q9UN71 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGB4Q9UN71 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHGB4Q9UN71 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHGB4Q9UN71 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB4Q9UN71 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB4Q9UN71 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB4Q9UN71 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
PCDHGB4Q9UN71 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.61■■□□□ 1.53
PCDHGB4Q9UN71 CAHM-201ENST00000604200 896 ntBASIC24.61■■□□□ 1.53
PCDHGB4Q9UN71 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB4Q9UN71 DRD5P2-201ENST00000421395 2012 ntBASIC24.61■■□□□ 1.53
PCDHGB4Q9UN71 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB4Q9UN71 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB4Q9UN71 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB4Q9UN71 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB4Q9UN71 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHGB4Q9UN71 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 293.9 ms