Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COMMD4Q9H0A8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COMMD4Q9H0A8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COMMD4Q9H0A8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COMMD4Q9H0A8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COMMD4Q9H0A8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.7■■□□□ 1.22
COMMD4Q9H0A8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
COMMD4Q9H0A8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
COMMD4Q9H0A8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
COMMD4Q9H0A8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COMMD4Q9H0A8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COMMD4Q9H0A8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
COMMD4Q9H0A8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COMMD4Q9H0A8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COMMD4Q9H0A8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COMMD4Q9H0A8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COMMD4Q9H0A8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COMMD4Q9H0A8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COMMD4Q9H0A8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.67■■□□□ 1.22
COMMD4Q9H0A8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 AL121749.1-202ENST00000609313 2153 ntBASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COMMD4Q9H0A8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.65■■□□□ 1.22
COMMD4Q9H0A8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COMMD4Q9H0A8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COMMD4Q9H0A8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.64■■□□□ 1.21
COMMD4Q9H0A8 AP004833.2-201ENST00000532228 1454 ntBASIC22.64■■□□□ 1.21
COMMD4Q9H0A8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COMMD4Q9H0A8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COMMD4Q9H0A8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COMMD4Q9H0A8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COMMD4Q9H0A8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
COMMD4Q9H0A8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COMMD4Q9H0A8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.63■■□□□ 1.21
COMMD4Q9H0A8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COMMD4Q9H0A8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COMMD4Q9H0A8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.62■■□□□ 1.21
COMMD4Q9H0A8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
COMMD4Q9H0A8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COMMD4Q9H0A8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COMMD4Q9H0A8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COMMD4Q9H0A8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
COMMD4Q9H0A8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.61■■□□□ 1.21
COMMD4Q9H0A8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
COMMD4Q9H0A8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
COMMD4Q9H0A8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COMMD4Q9H0A8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COMMD4Q9H0A8 BX255925.1-201ENST00000566954 1854 ntBASIC22.6■■□□□ 1.21
COMMD4Q9H0A8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.59■■□□□ 1.21
COMMD4Q9H0A8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COMMD4Q9H0A8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COMMD4Q9H0A8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COMMD4Q9H0A8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
COMMD4Q9H0A8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COMMD4Q9H0A8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.58■■□□□ 1.21
COMMD4Q9H0A8 RARRES2P7-201ENST00000567349 469 ntBASIC22.58■■□□□ 1.21
COMMD4Q9H0A8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COMMD4Q9H0A8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
COMMD4Q9H0A8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD4Q9H0A8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD4Q9H0A8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD4Q9H0A8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.56■■□□□ 1.2
COMMD4Q9H0A8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COMMD4Q9H0A8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COMMD4Q9H0A8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COMMD4Q9H0A8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 SETD8P1-201ENST00000623146 1180 ntBASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.55■■□□□ 1.2
COMMD4Q9H0A8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD4Q9H0A8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COMMD4Q9H0A8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COMMD4Q9H0A8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
COMMD4Q9H0A8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COMMD4Q9H0A8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.53■■□□□ 1.2
COMMD4Q9H0A8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COMMD4Q9H0A8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COMMD4Q9H0A8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COMMD4Q9H0A8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COMMD4Q9H0A8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
COMMD4Q9H0A8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms