Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LSG1Q9H089 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
LSG1Q9H089 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.22■■■□□ 2.59
LSG1Q9H089 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.22■■■□□ 2.59
LSG1Q9H089 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.21■■■□□ 2.59
LSG1Q9H089 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.21■■■□□ 2.59
LSG1Q9H089 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LSG1Q9H089 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LSG1Q9H089 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
LSG1Q9H089 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LSG1Q9H089 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
LSG1Q9H089 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.18■■■□□ 2.58
LSG1Q9H089 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LSG1Q9H089 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
LSG1Q9H089 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.17■■■□□ 2.58
LSG1Q9H089 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.17■■■□□ 2.58
LSG1Q9H089 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.16■■■□□ 2.58
LSG1Q9H089 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.15■■■□□ 2.58
LSG1Q9H089 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
LSG1Q9H089 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.15■■■□□ 2.58
LSG1Q9H089 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
LSG1Q9H089 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
LSG1Q9H089 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
LSG1Q9H089 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
LSG1Q9H089 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LSG1Q9H089 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
LSG1Q9H089 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.13■■■□□ 2.57
LSG1Q9H089 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.12■■■□□ 2.57
LSG1Q9H089 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LSG1Q9H089 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
LSG1Q9H089 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.11■■■□□ 2.57
LSG1Q9H089 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.11■■■□□ 2.57
LSG1Q9H089 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.11■■■□□ 2.57
LSG1Q9H089 MIR3665-201ENST00000578708 105 ntBASIC31.11■■■□□ 2.57
LSG1Q9H089 AP006261.1-201ENST00000584783 668 ntBASIC31.1■■■□□ 2.57
LSG1Q9H089 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LSG1Q9H089 DRD5P2-201ENST00000421395 2012 ntBASIC31.09■■■□□ 2.57
LSG1Q9H089 MIR6090-201ENST00000622481 60 ntBASIC31.09■■■□□ 2.57
LSG1Q9H089 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LSG1Q9H089 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LSG1Q9H089 AP004833.2-201ENST00000532228 1454 ntBASIC31.08■■■□□ 2.57
LSG1Q9H089 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
LSG1Q9H089 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.07■■■□□ 2.56
LSG1Q9H089 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LSG1Q9H089 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LSG1Q9H089 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
LSG1Q9H089 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
LSG1Q9H089 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LSG1Q9H089 AL162393.1-201ENST00000437852 946 ntBASIC31.06■■■□□ 2.56
LSG1Q9H089 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
LSG1Q9H089 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.05■■■□□ 2.56
LSG1Q9H089 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.05■■■□□ 2.56
LSG1Q9H089 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
LSG1Q9H089 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LSG1Q9H089 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.04■■■□□ 2.56
LSG1Q9H089 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.04■■■□□ 2.56
LSG1Q9H089 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LSG1Q9H089 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LSG1Q9H089 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
LSG1Q9H089 AC087741.3-201ENST00000624270 1347 ntBASIC31.01■■■□□ 2.56
LSG1Q9H089 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
LSG1Q9H089 AC108673.1-201ENST00000510422 1159 ntBASIC31.01■■■□□ 2.55
LSG1Q9H089 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
LSG1Q9H089 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
LSG1Q9H089 AC142086.6-201ENST00000621154 1765 ntBASIC31■■■□□ 2.55
LSG1Q9H089 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LSG1Q9H089 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
LSG1Q9H089 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31■■■□□ 2.55
LSG1Q9H089 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
LSG1Q9H089 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.97■■■□□ 2.55
LSG1Q9H089 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
LSG1Q9H089 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
LSG1Q9H089 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
LSG1Q9H089 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
LSG1Q9H089 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LSG1Q9H089 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LSG1Q9H089 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LSG1Q9H089 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LSG1Q9H089 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LSG1Q9H089 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
LSG1Q9H089 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LSG1Q9H089 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.91■■■□□ 2.54
LSG1Q9H089 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
LSG1Q9H089 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
LSG1Q9H089 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
LSG1Q9H089 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
LSG1Q9H089 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
LSG1Q9H089 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
LSG1Q9H089 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.9■■■□□ 2.54
LSG1Q9H089 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.9■■■□□ 2.54
LSG1Q9H089 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.88■■■□□ 2.53
LSG1Q9H089 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
LSG1Q9H089 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
LSG1Q9H089 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
LSG1Q9H089 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
LSG1Q9H089 AC100797.4-201ENST00000631653 1827 ntBASIC30.87■■■□□ 2.53
LSG1Q9H089 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LSG1Q9H089 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LSG1Q9H089 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
LSG1Q9H089 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms