Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E2Q96LR5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 AC127502.1-201ENST00000399971 1502 ntBASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UBE2E2Q96LR5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
UBE2E2Q96LR5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E2Q96LR5 LINC00273-201ENST00000539813 1452 ntBASIC20.13■□□□□ 0.81
UBE2E2Q96LR5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E2Q96LR5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
UBE2E2Q96LR5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
UBE2E2Q96LR5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2E2Q96LR5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE2E2Q96LR5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.12■□□□□ 0.81
UBE2E2Q96LR5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE2E2Q96LR5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2E2Q96LR5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
UBE2E2Q96LR5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 DUX4L11-201ENST00000611504 1267 ntBASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 DUX4L12-201ENST00000614593 1267 ntBASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 DUX4L14-201ENST00000621227 1267 ntBASIC20.1■□□□□ 0.81
UBE2E2Q96LR5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.09■□□□□ 0.81
UBE2E2Q96LR5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2E2Q96LR5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE2E2Q96LR5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.08■□□□□ 0.81
UBE2E2Q96LR5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
UBE2E2Q96LR5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.07■□□□□ 0.8
UBE2E2Q96LR5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E2Q96LR5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2E2Q96LR5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2E2Q96LR5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E2Q96LR5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2E2Q96LR5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E2Q96LR5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2E2Q96LR5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UBE2E2Q96LR5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E2Q96LR5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E2Q96LR5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E2Q96LR5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E2Q96LR5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E2Q96LR5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE2E2Q96LR5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E2Q96LR5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L13-201ENST00000554103 1267 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L15-201ENST00000611059 1267 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L23-201ENST00000615195 1269 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L24-201ENST00000617576 1269 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L22-201ENST00000618238 1269 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L20-201ENST00000619712 1269 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L21-201ENST00000622058 1269 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L10-201ENST00000622460 1267 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 DUX4L25-201ENST00000624915 1269 ntBASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E2Q96LR5 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2E2Q96LR5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2E2Q96LR5 HLA-V-202ENST00000446817 847 ntBASIC20.01■□□□□ 0.79
UBE2E2Q96LR5 MIR3648-2-201ENST00000581792 180 ntBASIC20.01■□□□□ 0.79
UBE2E2Q96LR5 MIR3648-1-201ENST00000615959 180 ntBASIC20.01■□□□□ 0.79
UBE2E2Q96LR5 AC135983.2-203ENST00000454486 1613 ntBASIC20.01■□□□□ 0.79
UBE2E2Q96LR5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E2Q96LR5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E2Q96LR5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E2Q96LR5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UBE2E2Q96LR5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E2Q96LR5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20■□□□□ 0.79
UBE2E2Q96LR5 CHML-204ENST00000638121 920 ntTSL 2 BASIC20■□□□□ 0.79
UBE2E2Q96LR5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E2Q96LR5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E2Q96LR5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E2Q96LR5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.98■□□□□ 0.79
UBE2E2Q96LR5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE2E2Q96LR5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 CR559946.2-201ENST00000623684 991 ntBASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E2Q96LR5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
UBE2E2Q96LR5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E2Q96LR5 AC016575.1-201ENST00000607026 382 ntBASIC19.96■□□□□ 0.79
UBE2E2Q96LR5 AP004833.2-201ENST00000532228 1454 ntBASIC19.96■□□□□ 0.79
UBE2E2Q96LR5 WHAMMP2-203ENST00000563942 1603 ntBASIC19.95■□□□□ 0.78
UBE2E2Q96LR5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBE2E2Q96LR5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E2Q96LR5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms