Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TMEM40Q8WWA1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.69■■■□□ 2.18
TMEM40Q8WWA1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TMEM40Q8WWA1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
TMEM40Q8WWA1 LINC00273-201ENST00000539813 1452 ntBASIC28.67■■■□□ 2.18
TMEM40Q8WWA1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TMEM40Q8WWA1 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TMEM40Q8WWA1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TMEM40Q8WWA1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
TMEM40Q8WWA1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TMEM40Q8WWA1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TMEM40Q8WWA1 AL135925.1-201ENST00000605920 1701 ntBASIC28.6■■■□□ 2.17
TMEM40Q8WWA1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM40Q8WWA1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM40Q8WWA1 AC127502.1-201ENST00000399971 1502 ntBASIC28.58■■■□□ 2.17
TMEM40Q8WWA1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.57■■■□□ 2.16
TMEM40Q8WWA1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.57■■■□□ 2.16
TMEM40Q8WWA1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
TMEM40Q8WWA1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
TMEM40Q8WWA1 HSD17B1P1-201ENST00000590052 955 ntBASIC28.55■■■□□ 2.16
TMEM40Q8WWA1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TMEM40Q8WWA1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
TMEM40Q8WWA1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TMEM40Q8WWA1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
TMEM40Q8WWA1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TMEM40Q8WWA1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TMEM40Q8WWA1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TMEM40Q8WWA1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.5■■■□□ 2.15
TMEM40Q8WWA1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.49■■■□□ 2.15
TMEM40Q8WWA1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
TMEM40Q8WWA1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
TMEM40Q8WWA1 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.48■■■□□ 2.15
TMEM40Q8WWA1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.47■■■□□ 2.15
TMEM40Q8WWA1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TMEM40Q8WWA1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TMEM40Q8WWA1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
TMEM40Q8WWA1 WHAMMP2-203ENST00000563942 1603 ntBASIC28.45■■■□□ 2.14
TMEM40Q8WWA1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 AC135983.2-203ENST00000454486 1613 ntBASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
TMEM40Q8WWA1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.43■■■□□ 2.14
TMEM40Q8WWA1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
TMEM40Q8WWA1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TMEM40Q8WWA1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.4■■■□□ 2.14
TMEM40Q8WWA1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
TMEM40Q8WWA1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMEM40Q8WWA1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMEM40Q8WWA1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
TMEM40Q8WWA1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TMEM40Q8WWA1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TMEM40Q8WWA1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms