Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PPP4R1Q8TF05 DRD5P2-201ENST00000421395 2012 ntBASIC25.76■■□□□ 1.72
PPP4R1Q8TF05 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PPP4R1Q8TF05 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PPP4R1Q8TF05 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.74■■□□□ 1.71
PPP4R1Q8TF05 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
PPP4R1Q8TF05 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
PPP4R1Q8TF05 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PPP4R1Q8TF05 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
PPP4R1Q8TF05 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
PPP4R1Q8TF05 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
PPP4R1Q8TF05 AL391121.1-201ENST00000607967 1349 ntBASIC25.7■■□□□ 1.71
PPP4R1Q8TF05 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PPP4R1Q8TF05 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.7■■□□□ 1.7
PPP4R1Q8TF05 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PPP4R1Q8TF05 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PPP4R1Q8TF05 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.69■■□□□ 1.7
PPP4R1Q8TF05 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PPP4R1Q8TF05 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PPP4R1Q8TF05 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PPP4R1Q8TF05 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PPP4R1Q8TF05 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PPP4R1Q8TF05 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
PPP4R1Q8TF05 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R1Q8TF05 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.65■■□□□ 1.7
PPP4R1Q8TF05 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PPP4R1Q8TF05 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PPP4R1Q8TF05 AP006261.1-201ENST00000584783 668 ntBASIC25.64■■□□□ 1.7
PPP4R1Q8TF05 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PPP4R1Q8TF05 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R1Q8TF05 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.62■■□□□ 1.69
PPP4R1Q8TF05 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R1Q8TF05 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R1Q8TF05 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R1Q8TF05 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R1Q8TF05 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R1Q8TF05 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R1Q8TF05 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PPP4R1Q8TF05 AC010864.1-201ENST00000609407 1511 ntBASIC25.61■■□□□ 1.69
PPP4R1Q8TF05 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PPP4R1Q8TF05 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.6■■□□□ 1.69
PPP4R1Q8TF05 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PPP4R1Q8TF05 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PPP4R1Q8TF05 AL121749.1-202ENST00000609313 2153 ntBASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 AL162393.1-201ENST00000437852 946 ntBASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R1Q8TF05 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R1Q8TF05 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R1Q8TF05 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.58■■□□□ 1.69
PPP4R1Q8TF05 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R1Q8TF05 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PPP4R1Q8TF05 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R1Q8TF05 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PPP4R1Q8TF05 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R1Q8TF05 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R1Q8TF05 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R1Q8TF05 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R1Q8TF05 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.54■■□□□ 1.68
PPP4R1Q8TF05 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.54■■□□□ 1.68
PPP4R1Q8TF05 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PPP4R1Q8TF05 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PPP4R1Q8TF05 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
PPP4R1Q8TF05 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.53■■□□□ 1.68
PPP4R1Q8TF05 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R1Q8TF05 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R1Q8TF05 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R1Q8TF05 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PPP4R1Q8TF05 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R1Q8TF05 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R1Q8TF05 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R1Q8TF05 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R1Q8TF05 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
PPP4R1Q8TF05 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R1Q8TF05 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PPP4R1Q8TF05 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PPP4R1Q8TF05 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.5■■□□□ 1.67
PPP4R1Q8TF05 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PPP4R1Q8TF05 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PPP4R1Q8TF05 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PPP4R1Q8TF05 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
PPP4R1Q8TF05 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R1Q8TF05 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PPP4R1Q8TF05 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PPP4R1Q8TF05 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms