Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC36.75■■■■□ 3.47
ARHGEF28Q8N1W1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC36.75■■■■□ 3.47
ARHGEF28Q8N1W1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC36.75■■■■□ 3.47
ARHGEF28Q8N1W1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC36.74■■■■□ 3.47
ARHGEF28Q8N1W1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC36.74■■■■□ 3.47
ARHGEF28Q8N1W1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC36.74■■■■□ 3.47
ARHGEF28Q8N1W1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
ARHGEF28Q8N1W1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC36.73■■■■□ 3.47
ARHGEF28Q8N1W1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
ARHGEF28Q8N1W1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC36.73■■■■□ 3.47
ARHGEF28Q8N1W1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
ARHGEF28Q8N1W1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC36.7■■■■□ 3.47
ARHGEF28Q8N1W1 HES6-205ENST00000409356 528 ntTSL 2 BASIC36.7■■■■□ 3.47
ARHGEF28Q8N1W1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC36.69■■■■□ 3.46
ARHGEF28Q8N1W1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC36.68■■■■□ 3.46
ARHGEF28Q8N1W1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC36.66■■■■□ 3.46
ARHGEF28Q8N1W1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC36.66■■■■□ 3.46
ARHGEF28Q8N1W1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ARHGEF28Q8N1W1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC36.65■■■■□ 3.46
ARHGEF28Q8N1W1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
ARHGEF28Q8N1W1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC36.65■■■■□ 3.46
ARHGEF28Q8N1W1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
ARHGEF28Q8N1W1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC36.64■■■■□ 3.46
ARHGEF28Q8N1W1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
ARHGEF28Q8N1W1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC36.63■■■■□ 3.45
ARHGEF28Q8N1W1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC36.63■■■■□ 3.45
ARHGEF28Q8N1W1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
ARHGEF28Q8N1W1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
ARHGEF28Q8N1W1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
ARHGEF28Q8N1W1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
ARHGEF28Q8N1W1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC36.61■■■■□ 3.45
ARHGEF28Q8N1W1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC36.6■■■■□ 3.45
ARHGEF28Q8N1W1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
ARHGEF28Q8N1W1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
ARHGEF28Q8N1W1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 AC135983.2-203ENST00000454486 1613 ntBASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 AL135925.1-201ENST00000605920 1701 ntBASIC36.58■■■■□ 3.45
ARHGEF28Q8N1W1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC36.56■■■■□ 3.44
ARHGEF28Q8N1W1 WHAMMP2-203ENST00000563942 1603 ntBASIC36.56■■■■□ 3.44
ARHGEF28Q8N1W1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
ARHGEF28Q8N1W1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC36.55■■■■□ 3.44
ARHGEF28Q8N1W1 AC127502.1-201ENST00000399971 1502 ntBASIC36.55■■■■□ 3.44
ARHGEF28Q8N1W1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
ARHGEF28Q8N1W1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC36.52■■■■□ 3.44
ARHGEF28Q8N1W1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC36.52■■■■□ 3.44
ARHGEF28Q8N1W1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
ARHGEF28Q8N1W1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC36.51■■■■□ 3.43
ARHGEF28Q8N1W1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC36.5■■■■□ 3.43
ARHGEF28Q8N1W1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC36.5■■■■□ 3.43
ARHGEF28Q8N1W1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
ARHGEF28Q8N1W1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC36.49■■■■□ 3.43
ARHGEF28Q8N1W1 ABHD17AP3-201ENST00000503096 1137 ntBASIC36.49■■■■□ 3.43
ARHGEF28Q8N1W1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
ARHGEF28Q8N1W1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC36.48■■■■□ 3.43
ARHGEF28Q8N1W1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC36.47■■■■□ 3.43
ARHGEF28Q8N1W1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC36.46■■■■□ 3.43
ARHGEF28Q8N1W1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
ARHGEF28Q8N1W1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC36.46■■■■□ 3.43
ARHGEF28Q8N1W1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
ARHGEF28Q8N1W1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
ARHGEF28Q8N1W1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
ARHGEF28Q8N1W1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF28Q8N1W1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC36.43■■■■□ 3.42
ARHGEF28Q8N1W1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
ARHGEF28Q8N1W1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC36.42■■■■□ 3.42
ARHGEF28Q8N1W1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC36.42■■■■□ 3.42
ARHGEF28Q8N1W1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC36.42■■■■□ 3.42
ARHGEF28Q8N1W1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
ARHGEF28Q8N1W1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
ARHGEF28Q8N1W1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC36.39■■■■□ 3.42
ARHGEF28Q8N1W1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC36.39■■■■□ 3.42
ARHGEF28Q8N1W1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC36.37■■■■□ 3.41
ARHGEF28Q8N1W1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC36.37■■■■□ 3.41
ARHGEF28Q8N1W1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
ARHGEF28Q8N1W1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
ARHGEF28Q8N1W1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
ARHGEF28Q8N1W1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC36.34■■■■□ 3.41
ARHGEF28Q8N1W1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC36.32■■■■□ 3.4
ARHGEF28Q8N1W1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC36.31■■■■□ 3.4
ARHGEF28Q8N1W1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC36.31■■■■□ 3.4
ARHGEF28Q8N1W1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC36.31■■■■□ 3.4
ARHGEF28Q8N1W1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
ARHGEF28Q8N1W1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC36.31■■■■□ 3.4
ARHGEF28Q8N1W1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
ARHGEF28Q8N1W1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC36.3■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms