Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3HC1Q86WB0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
ZC3HC1Q86WB0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3HC1Q86WB0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3HC1Q86WB0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3HC1Q86WB0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3HC1Q86WB0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.82■■□□□ 1.72
ZC3HC1Q86WB0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.82■■□□□ 1.72
ZC3HC1Q86WB0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3HC1Q86WB0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3HC1Q86WB0 AC127502.1-201ENST00000399971 1502 ntBASIC25.81■■□□□ 1.72
ZC3HC1Q86WB0 AP004833.2-201ENST00000532228 1454 ntBASIC25.8■■□□□ 1.72
ZC3HC1Q86WB0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3HC1Q86WB0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
ZC3HC1Q86WB0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
ZC3HC1Q86WB0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.79■■□□□ 1.72
ZC3HC1Q86WB0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.79■■□□□ 1.72
ZC3HC1Q86WB0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
ZC3HC1Q86WB0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
ZC3HC1Q86WB0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
ZC3HC1Q86WB0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.78■■□□□ 1.72
ZC3HC1Q86WB0 MIR762-201ENST00000390236 83 ntBASIC25.78■■□□□ 1.72
ZC3HC1Q86WB0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.77■■□□□ 1.72
ZC3HC1Q86WB0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3HC1Q86WB0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3HC1Q86WB0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
ZC3HC1Q86WB0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3HC1Q86WB0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3HC1Q86WB0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3HC1Q86WB0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3HC1Q86WB0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3HC1Q86WB0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3HC1Q86WB0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.75■■□□□ 1.71
ZC3HC1Q86WB0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3HC1Q86WB0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3HC1Q86WB0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.74■■□□□ 1.71
ZC3HC1Q86WB0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.74■■□□□ 1.71
ZC3HC1Q86WB0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3HC1Q86WB0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3HC1Q86WB0 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.73■■□□□ 1.71
ZC3HC1Q86WB0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZC3HC1Q86WB0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZC3HC1Q86WB0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 SUZ12P1-203ENST00000578195 985 ntBASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.72■■□□□ 1.71
ZC3HC1Q86WB0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3HC1Q86WB0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZC3HC1Q86WB0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3HC1Q86WB0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3HC1Q86WB0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3HC1Q86WB0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3HC1Q86WB0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.68■■□□□ 1.7
ZC3HC1Q86WB0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.68■■□□□ 1.7
ZC3HC1Q86WB0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3HC1Q86WB0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3HC1Q86WB0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3HC1Q86WB0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3HC1Q86WB0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.67■■□□□ 1.7
ZC3HC1Q86WB0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3HC1Q86WB0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3HC1Q86WB0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZC3HC1Q86WB0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZC3HC1Q86WB0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.65■■□□□ 1.7
ZC3HC1Q86WB0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
ZC3HC1Q86WB0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ZC3HC1Q86WB0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ZC3HC1Q86WB0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.63■■□□□ 1.69
ZC3HC1Q86WB0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3HC1Q86WB0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3HC1Q86WB0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.62■■□□□ 1.69
ZC3HC1Q86WB0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.62■■□□□ 1.69
ZC3HC1Q86WB0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3HC1Q86WB0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZC3HC1Q86WB0 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.61■■□□□ 1.69
ZC3HC1Q86WB0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.61■■□□□ 1.69
ZC3HC1Q86WB0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZC3HC1Q86WB0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
ZC3HC1Q86WB0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZC3HC1Q86WB0 AC005559.1-201ENST00000589661 871 ntBASIC25.6■■□□□ 1.69
ZC3HC1Q86WB0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.6■■□□□ 1.69
ZC3HC1Q86WB0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3HC1Q86WB0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.59■■□□□ 1.69
ZC3HC1Q86WB0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3HC1Q86WB0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
ZC3HC1Q86WB0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3HC1Q86WB0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
ZC3HC1Q86WB0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3HC1Q86WB0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms