Protein–RNA interactions for Protein: Q5VVX9

UBE2U, Ubiquitin-conjugating enzyme E2 U, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2UQ5VVX9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBE2UQ5VVX9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBE2UQ5VVX9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBE2UQ5VVX9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UBE2UQ5VVX9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
UBE2UQ5VVX9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.34■■□□□ 1.33
UBE2UQ5VVX9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
UBE2UQ5VVX9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBE2UQ5VVX9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBE2UQ5VVX9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.33■■□□□ 1.32
UBE2UQ5VVX9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
UBE2UQ5VVX9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
UBE2UQ5VVX9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBE2UQ5VVX9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBE2UQ5VVX9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBE2UQ5VVX9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBE2UQ5VVX9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.32■■□□□ 1.32
UBE2UQ5VVX9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBE2UQ5VVX9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBE2UQ5VVX9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBE2UQ5VVX9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBE2UQ5VVX9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBE2UQ5VVX9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBE2UQ5VVX9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBE2UQ5VVX9 AL449106.1-201ENST00000608517 1980 ntBASIC23.3■■□□□ 1.32
UBE2UQ5VVX9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBE2UQ5VVX9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBE2UQ5VVX9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBE2UQ5VVX9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
UBE2UQ5VVX9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.29■■□□□ 1.32
UBE2UQ5VVX9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
UBE2UQ5VVX9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
UBE2UQ5VVX9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.28■■□□□ 1.32
UBE2UQ5VVX9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
UBE2UQ5VVX9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
UBE2UQ5VVX9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBE2UQ5VVX9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBE2UQ5VVX9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.27■■□□□ 1.32
UBE2UQ5VVX9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBE2UQ5VVX9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.25■■□□□ 1.31
UBE2UQ5VVX9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBE2UQ5VVX9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.25■■□□□ 1.31
UBE2UQ5VVX9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.25■■□□□ 1.31
UBE2UQ5VVX9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UBE2UQ5VVX9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
UBE2UQ5VVX9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
UBE2UQ5VVX9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBE2UQ5VVX9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.23■■□□□ 1.31
UBE2UQ5VVX9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.23■■□□□ 1.31
UBE2UQ5VVX9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.23■■□□□ 1.31
UBE2UQ5VVX9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
UBE2UQ5VVX9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.21■■□□□ 1.31
UBE2UQ5VVX9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBE2UQ5VVX9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBE2UQ5VVX9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBE2UQ5VVX9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBE2UQ5VVX9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBE2UQ5VVX9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.18■■□□□ 1.3
UBE2UQ5VVX9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBE2UQ5VVX9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
UBE2UQ5VVX9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.17■■□□□ 1.3
UBE2UQ5VVX9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBE2UQ5VVX9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBE2UQ5VVX9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.16■■□□□ 1.3
UBE2UQ5VVX9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBE2UQ5VVX9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBE2UQ5VVX9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBE2UQ5VVX9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.15■■□□□ 1.3
UBE2UQ5VVX9 LINC01003-201ENST00000564834 1764 ntBASIC23.14■■□□□ 1.3
UBE2UQ5VVX9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
UBE2UQ5VVX9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
UBE2UQ5VVX9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE2UQ5VVX9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE2UQ5VVX9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms