Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.444e-7■■■■■ 32.6
CSTF2P33240 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.4□□□□□ -1.554e-7■■■■■ 32.6
CSTF2P33240 EPC2-202ENST00000397424 672 ntTSL 318.98■□□□□ 0.637e-7■■■■■ 32.6
CSTF2P33240 EPC2-205ENST00000457184 724 ntTSL 518.68■□□□□ 0.587e-7■■■■■ 32.6
CSTF2P33240 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.547e-7■■■■■ 32.6
CSTF2P33240 ATP11A-213ENST00000489577 383 ntTSL 510.61□□□□□ -0.717e-10■■■■■ 32.5
CSTF2P33240 ATP11A-208ENST00000459908 4516 ntTSL 210.48□□□□□ -0.737e-10■■■■■ 32.5
CSTF2P33240 ATP11A-204ENST00000418678 3163 ntAPPRIS ALT2 TSL 1 (best)7.31□□□□□ -1.247e-10■■■■■ 32.5
CSTF2P33240 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.084e-9■■■■■ 32.5
CSTF2P33240 FNDC3B-207ENST00000469491 2916 ntTSL 215.67■□□□□ 0.12e-7■■■■■ 32.4
CSTF2P33240 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.18■□□□□ 0.665e-7■■■■■ 32.4
CSTF2P33240 ESPN-217ENST00000636644 544 ntTSL 517.82■□□□□ 0.445e-7■■■■■ 32.4
CSTF2P33240 ESPN-214ENST00000633239 1494 ntTSL 517.8■□□□□ 0.445e-7■■■■■ 32.4
CSTF2P33240 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.47■□□□□ 0.395e-7■■■■■ 32.4
CSTF2P33240 ESPN-207ENST00000475228 813 ntTSL 516.96■□□□□ 0.315e-7■■■■■ 32.4
CSTF2P33240 ESPN-209ENST00000477679 885 ntTSL 213.99□□□□□ -0.175e-7■■■■■ 32.4
CSTF2P33240 ESPN-204ENST00000434576 750 ntTSL 313.99□□□□□ -0.175e-7■■■■■ 32.4
CSTF2P33240 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.265e-7■■■■■ 32.4
CSTF2P33240 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)21.48■■□□□ 1.032e-6■■■■■ 32.4
CSTF2P33240 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.012e-6■■■■■ 32.4
CSTF2P33240 STAT5B-202ENST00000415845 559 ntTSL 46.62□□□□□ -1.352e-6■■■■■ 32.4
CSTF2P33240 LINC-PINT-204ENST00000431189 803 ntTSL 321.36■■□□□ 1.018e-12■■■■■ 32.3
CSTF2P33240 LINC-PINT-205ENST00000433079 1262 ntTSL 1 (best)17.77■□□□□ 0.448e-12■■■■■ 32.3
CSTF2P33240 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC11.39□□□□□ -0.598e-12■■■■■ 32.3
CSTF2P33240 LINC-PINT-206ENST00000435523 553 ntTSL 34.13□□□□□ -1.758e-12■■■■■ 32.3
CSTF2P33240 CDHR3-209ENST00000472116 993 ntTSL 210.44□□□□□ -0.743e-7■■■■■ 32.3
CSTF2P33240 CAPRIN2-205ENST00000454014 4398 ntTSL 1 (best)11.64□□□□□ -0.551e-11■■■■■ 32.1
CSTF2P33240 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.611e-11■■■■■ 32.1
CSTF2P33240 MRPL33-203ENST00000448427 527 ntTSL 49.97□□□□□ -0.811e-11■■■■■ 32.1
CSTF2P33240 CAPRIN2-208ENST00000537553 6543 ntTSL 26.97□□□□□ -1.291e-11■■■■■ 32.1
CSTF2P33240 CAPRIN2-204ENST00000433722 3012 ntTSL 1 (best)6.77□□□□□ -1.331e-11■■■■■ 32.1
CSTF2P33240 CAPRIN2-216ENST00000548676 3221 ntTSL 1 (best)6.47□□□□□ -1.371e-11■■■■■ 32.1
CSTF2P33240 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.3□□□□□ -1.41e-11■■■■■ 32.1
CSTF2P33240 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.87□□□□□ -1.471e-11■■■■■ 32.1
CSTF2P33240 AP1G1-210ENST00000565412 619 ntTSL 318.33■□□□□ 0.522e-9■■■■■ 32
CSTF2P33240 AP1G1-214ENST00000567583 606 ntTSL 218.22■□□□□ 0.512e-9■■■■■ 32
CSTF2P33240 AP1G1-205ENST00000563104 882 ntTSL 418.22■□□□□ 0.512e-9■■■■■ 32
CSTF2P33240 AP1G1-215ENST00000568327 1724 ntTSL 517.58■□□□□ 0.412e-9■■■■■ 32
CSTF2P33240 AP1G1-206ENST00000563259 844 ntTSL 416.43■□□□□ 0.222e-9■■■■■ 32
CSTF2P33240 AP1G1-217ENST00000569185 559 ntTSL 313.2□□□□□ -0.32e-9■■■■■ 32
CSTF2P33240 AP1G1-208ENST00000565009 2494 ntTSL 512.83□□□□□ -0.362e-9■■■■■ 32
CSTF2P33240 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.512e-9■■■■■ 32
CSTF2P33240 AP1G1-212ENST00000566161 989 ntTSL 411.71□□□□□ -0.532e-9■■■■■ 32
CSTF2P33240 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.972e-9■■■■■ 32
CSTF2P33240 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.122e-9■■■■■ 32
CSTF2P33240 AP1G1-203ENST00000450149 1166 ntTSL 25□□□□□ -1.612e-9■■■■■ 32
CSTF2P33240 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.347e-14■■■■■ 32
CSTF2P33240 ZNF580-206ENST00000592881 1019 ntTSL 321.01■□□□□ 0.952e-6■■■■■ 32
CSTF2P33240 MAGI1-207ENST00000470990 2138 ntTSL 1 (best)7.67□□□□□ -1.182e-6■■■■■ 32
CSTF2P33240 TBC1D8-204ENST00000463469 561 ntTSL 415.15■□□□□ 0.022e-7■■■■■ 32
CSTF2P33240 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.4□□□□□ -0.12e-7■■■■■ 32
CSTF2P33240 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.522e-7■■■■■ 32
CSTF2P33240 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.31■□□□□ 0.524e-10■■■■■ 32
CSTF2P33240 SNHG10-203ENST00000554169 981 ntTSL 213.78□□□□□ -0.24e-10■■■■■ 32
CSTF2P33240 SUPT3H-205ENST00000475057 1377 ntTSL 27.09□□□□□ -1.271e-7■■■■■ 31.9
CSTF2P33240 PLEKHA1-207ENST00000481451 8619 ntTSL 22.72□□□□□ -1.971e-11■■■■■ 31.9
CSTF2P33240 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.461e-10■■■■■ 31.8
CSTF2P33240 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.611e-10■■■■■ 31.8
CSTF2P33240 RPS3-202ENST00000422465 903 ntTSL 29.68□□□□□ -0.861e-10■■■■■ 31.8
CSTF2P33240 ZFAS1-209ENST00000620594 508 ntTSL 37.66□□□□□ -1.182e-16■■■■■ 31.8
CSTF2P33240 DENND1A-207ENST00000474676 603 ntTSL 59.51□□□□□ -0.891e-9■■■■■ 31.8
CSTF2P33240 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.132e-15■■■■■ 31.8
CSTF2P33240 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.082e-15■■■■■ 31.8
CSTF2P33240 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.638e-7■■■■■ 31.7
CSTF2P33240 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.98e-7■■■■■ 31.7
CSTF2P33240 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.11□□□□□ -1.278e-7■■■■■ 31.7
CSTF2P33240 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.648e-7■■■■■ 31.7
CSTF2P33240 PTPRK-209ENST00000415046 1029 ntTSL 54.14□□□□□ -1.753e-7■■■■■ 31.7
CSTF2P33240 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.221e-11■■■■■ 31.7
CSTF2P33240 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.131e-11■■■■■ 31.7
CSTF2P33240 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.571e-11■■■■■ 31.7
CSTF2P33240 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.92□□□□□ -1.141e-11■■■■■ 31.7
CSTF2P33240 ZNF655-207ENST00000419215 4346 ntTSL 1 (best)7.59□□□□□ -1.191e-11■■■■■ 31.7
CSTF2P33240 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.12e-7■■■■■ 31.7
CSTF2P33240 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.28■■□□□ 1.168e-7■■■■■ 31.6
CSTF2P33240 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.28e-7■■■■■ 31.6
CSTF2P33240 RILPL1-201ENST00000340724 2389 ntTSL 513.34□□□□□ -0.278e-7■■■■■ 31.6
CSTF2P33240 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.261e-6■■■■■ 31.6
CSTF2P33240 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.211e-6■■■■■ 31.6
CSTF2P33240 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.348e-11■■■■■ 31.6
CSTF2P33240 ADGRD1-210ENST00000541143 7085 ntTSL 211.41□□□□□ -0.588e-11■■■■■ 31.6
CSTF2P33240 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC9.32□□□□□ -0.928e-11■■■■■ 31.6
CSTF2P33240 ADGRD1-212ENST00000542091 735 ntTSL 37.03□□□□□ -1.288e-11■■■■■ 31.6
CSTF2P33240 PLCB1-207ENST00000475958 443 ntTSL 34.19□□□□□ -1.745e-7■■■■■ 31.5
CSTF2P33240 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.791e-6■■■■■ 31.5
CSTF2P33240 SKIV2L2-204ENST00000504388 590 ntTSL 410.52□□□□□ -0.732e-11■■■■■ 31.5
CSTF2P33240 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.132e-11■■■■■ 31.5
CSTF2P33240 SKIV2L2-203ENST00000503165 571 ntTSL 57.38□□□□□ -1.232e-11■■■■■ 31.5
CSTF2P33240 SKIV2L2-205ENST00000504997 500 ntTSL 45.86□□□□□ -1.472e-11■■■■■ 31.5
CSTF2P33240 SKIV2L2-207ENST00000506750 3271 ntTSL 24.25□□□□□ -1.732e-11■■■■■ 31.5
CSTF2P33240 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.77■□□□□ 0.62e-6■■■■■ 31.5
CSTF2P33240 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC10.55□□□□□ -0.721e-8■■■■■ 31.5
CSTF2P33240 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.95□□□□□ -0.183e-7■■■■■ 31.5
CSTF2P33240 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.53e-7■■■■■ 31.5
CSTF2P33240 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.64□□□□□ -1.193e-7■■■■■ 31.5
CSTF2P33240 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.39■□□□□ 0.855e-17■■■■■ 31.4
CSTF2P33240 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.335e-17■■■■■ 31.4
CSTF2P33240 TMPO-211ENST00000552831 743 ntTSL 22.42□□□□□ -2.025e-17■■■■■ 31.4
CSTF2P33240 CHD6-209ENST00000482596 599 ntTSL 1 (best)6.92□□□□□ -1.34e-7■■■■■ 31.4
CSTF2P33240 CHD6-204ENST00000440647 536 ntTSL 35.83□□□□□ -1.484e-7■■■■■ 31.4
Retrieved 100 of 6,735 protein–RNA pairs in 113.3 ms