RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-208ENST00000459908 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
ATP11A-208ENST00000459908 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
ATP11A-208ENST00000459908 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.58
ATP11A-208ENST00000459908 ABCC9O60706 1549 aa18.6■□□□□ 0.57
ATP11A-208ENST00000459908 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.53
ATP11A-208ENST00000459908 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
ATP11A-208ENST00000459908 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
ATP11A-208ENST00000459908 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
ATP11A-208ENST00000459908 ZCCHC6Q5VYS8 1495 aaKnown RBP17.47■□□□□ 0.39
ATP11A-208ENST00000459908 NACADO15069 1562 aa17.37■□□□□ 0.37
ATP11A-208ENST00000459908 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
ATP11A-208ENST00000459908 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
ATP11A-208ENST00000459908 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
ATP11A-208ENST00000459908 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
ATP11A-208ENST00000459908 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
ATP11A-208ENST00000459908 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
ATP11A-208ENST00000459908 APLP2Q06481 763 aa16.89■□□□□ 0.29
ATP11A-208ENST00000459908 UBTFP17480 764 aaKnown RBP16.83■□□□□ 0.28
ATP11A-208ENST00000459908 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
ATP11A-208ENST00000459908 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
ATP11A-208ENST00000459908 FBLN2P98095 1184 aa16.72■□□□□ 0.27
ATP11A-208ENST00000459908 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
ATP11A-208ENST00000459908 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
ATP11A-208ENST00000459908 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
ATP11A-208ENST00000459908 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
ATP11A-208ENST00000459908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
ATP11A-208ENST00000459908 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
ATP11A-208ENST00000459908 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
ATP11A-208ENST00000459908 RSF1Q96T23 1441 aaPredicted RBP16.52■□□□□ 0.24
ATP11A-208ENST00000459908 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
ATP11A-208ENST00000459908 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
ATP11A-208ENST00000459908 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
ATP11A-208ENST00000459908 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
ATP11A-208ENST00000459908 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
ATP11A-208ENST00000459908 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
ATP11A-208ENST00000459908 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
ATP11A-208ENST00000459908 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
ATP11A-208ENST00000459908 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
ATP11A-208ENST00000459908 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
ATP11A-208ENST00000459908 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
ATP11A-208ENST00000459908 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
ATP11A-208ENST00000459908 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
ATP11A-208ENST00000459908 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
ATP11A-208ENST00000459908 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
ATP11A-208ENST00000459908 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
ATP11A-208ENST00000459908 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
ATP11A-208ENST00000459908 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
ATP11A-208ENST00000459908 ARID3CA6NKF2 412 aa16.06■□□□□ 0.16
ATP11A-208ENST00000459908 PPARGC1BQ86YN6 1023 aaKnown RBP16.05■□□□□ 0.16
ATP11A-208ENST00000459908 CC2D2AQ9P2K1 1620 aa16.04■□□□□ 0.16
ATP11A-208ENST00000459908 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
ATP11A-208ENST00000459908 WIZO95785 1651 aa16.02■□□□□ 0.16
ATP11A-208ENST00000459908 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
ATP11A-208ENST00000459908 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
ATP11A-208ENST00000459908 ITGAEP38570 1179 aa15.97■□□□□ 0.15
ATP11A-208ENST00000459908 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
ATP11A-208ENST00000459908 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
ATP11A-208ENST00000459908 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
ATP11A-208ENST00000459908 SOGA1O94964 1423 aa15.89■□□□□ 0.13
ATP11A-208ENST00000459908 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
ATP11A-208ENST00000459908 CUX2O14529 1486 aa15.85■□□□□ 0.13
ATP11A-208ENST00000459908 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
ATP11A-208ENST00000459908 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
ATP11A-208ENST00000459908 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
ATP11A-208ENST00000459908 HMGXB3Q12766 1538 aa15.77■□□□□ 0.12
ATP11A-208ENST00000459908 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
ATP11A-208ENST00000459908 ABCC8Q09428 1581 aa15.77■□□□□ 0.11
ATP11A-208ENST00000459908 NESP48681 1621 aa15.76■□□□□ 0.11
ATP11A-208ENST00000459908 EEA1Q15075 1411 aa15.75■□□□□ 0.11
ATP11A-208ENST00000459908 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
ATP11A-208ENST00000459908 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
ATP11A-208ENST00000459908 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
ATP11A-208ENST00000459908 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
ATP11A-208ENST00000459908 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
ATP11A-208ENST00000459908 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
ATP11A-208ENST00000459908 PLEKHD1A6NEE1 506 aa15.66■□□□□ 0.1
ATP11A-208ENST00000459908 CFTRP13569 1480 aa15.65■□□□□ 0.1
ATP11A-208ENST00000459908 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
ATP11A-208ENST00000459908 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
ATP11A-208ENST00000459908 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.08
ATP11A-208ENST00000459908 GOLGA3Q08378 1498 aa15.58■□□□□ 0.08
ATP11A-208ENST00000459908 CARMIL2Q6F5E8 1435 aa15.58■□□□□ 0.08
ATP11A-208ENST00000459908 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
ATP11A-208ENST00000459908 CLIP1P30622 1438 aa15.56■□□□□ 0.08
ATP11A-208ENST00000459908 MTUS2Q5JR59 1369 aa15.55■□□□□ 0.08
ATP11A-208ENST00000459908 JPH4Q96JJ6 628 aa15.55■□□□□ 0.08
ATP11A-208ENST00000459908 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
ATP11A-208ENST00000459908 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
ATP11A-208ENST00000459908 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
ATP11A-208ENST00000459908 LAMC3Q9Y6N6 1575 aa15.52■□□□□ 0.07
ATP11A-208ENST00000459908 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.073e-9■■■■□ 24.8
ATP11A-208ENST00000459908 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
ATP11A-208ENST00000459908 TSPY4P0CV99 314 aa15.48■□□□□ 0.07
ATP11A-208ENST00000459908 TSPY10P0CW01 314 aa15.48■□□□□ 0.07
ATP11A-208ENST00000459908 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
ATP11A-208ENST00000459908 ARID4BQ4LE39 1312 aaPredicted RBP15.44■□□□□ 0.06
ATP11A-208ENST00000459908 BCANQ96GW7 911 aa15.43■□□□□ 0.06
ATP11A-208ENST00000459908 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
ATP11A-208ENST00000459908 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
ATP11A-208ENST00000459908 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms