RNA–Protein interactions for RNA: ENST00000230640.9

SKIV2L2-201, Transcript of Superkiller viralicidic activity 2-like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKIV2L2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L2-201ENST00000230640 NISCHQ9Y2I1 1504 aa16.46■□□□□ 0.23
SKIV2L2-201ENST00000230640 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
SKIV2L2-201ENST00000230640 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
SKIV2L2-201ENST00000230640 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
SKIV2L2-201ENST00000230640 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
SKIV2L2-201ENST00000230640 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
SKIV2L2-201ENST00000230640 ABCC9O60706 1549 aa13.72□□□□□ -0.21
SKIV2L2-201ENST00000230640 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
SKIV2L2-201ENST00000230640 FAM9AQ8IZU1 332 aaPredicted RBP13.61□□□□□ -0.23
SKIV2L2-201ENST00000230640 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
SKIV2L2-201ENST00000230640 CHIC1Q5VXU3 224 aa13.53□□□□□ -0.24
SKIV2L2-201ENST00000230640 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
SKIV2L2-201ENST00000230640 SCRIBQ14160 1630 aa13.36□□□□□ -0.27
SKIV2L2-201ENST00000230640 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
SKIV2L2-201ENST00000230640 LOC105371045A0A1W2PR82 267 aa13.29□□□□□ -0.28
SKIV2L2-201ENST00000230640 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
SKIV2L2-201ENST00000230640 TTBK1Q5TCY1 1321 aaPredicted RBP13.19□□□□□ -0.3
SKIV2L2-201ENST00000230640 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
SKIV2L2-201ENST00000230640 APLP2Q06481 763 aa13.17□□□□□ -0.3
SKIV2L2-201ENST00000230640 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
SKIV2L2-201ENST00000230640 NACADO15069 1562 aa13.12□□□□□ -0.31
SKIV2L2-201ENST00000230640 RB1CC1Q8TDY2 1594 aa13.09□□□□□ -0.31
SKIV2L2-201ENST00000230640 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
SKIV2L2-201ENST00000230640 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
SKIV2L2-201ENST00000230640 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.32
SKIV2L2-201ENST00000230640 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
SKIV2L2-201ENST00000230640 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
SKIV2L2-201ENST00000230640 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
SKIV2L2-201ENST00000230640 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
SKIV2L2-201ENST00000230640 HRCP23327 699 aa12.9□□□□□ -0.34
SKIV2L2-201ENST00000230640 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
SKIV2L2-201ENST00000230640 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
SKIV2L2-201ENST00000230640 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.36
SKIV2L2-201ENST00000230640 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
SKIV2L2-201ENST00000230640 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
SKIV2L2-201ENST00000230640 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
SKIV2L2-201ENST00000230640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
SKIV2L2-201ENST00000230640 WIZO95785 1651 aa12.62□□□□□ -0.39
SKIV2L2-201ENST00000230640 ITGAEP38570 1179 aa12.6□□□□□ -0.39
SKIV2L2-201ENST00000230640 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
SKIV2L2-201ENST00000230640 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
SKIV2L2-201ENST00000230640 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
SKIV2L2-201ENST00000230640 EEA1Q15075 1411 aa12.5□□□□□ -0.41
SKIV2L2-201ENST00000230640 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
SKIV2L2-201ENST00000230640 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
SKIV2L2-201ENST00000230640 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
SKIV2L2-201ENST00000230640 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
SKIV2L2-201ENST00000230640 SOGA1O94964 1423 aa12.43□□□□□ -0.42
SKIV2L2-201ENST00000230640 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
SKIV2L2-201ENST00000230640 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
SKIV2L2-201ENST00000230640 CENPBP07199 599 aaPredicted RBP12.41□□□□□ -0.42
SKIV2L2-201ENST00000230640 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
SKIV2L2-201ENST00000230640 CLIP1P30622 1438 aa12.4□□□□□ -0.42
SKIV2L2-201ENST00000230640 FAM50AQ14320 339 aaKnown RBP12.4□□□□□ -0.42
SKIV2L2-201ENST00000230640 TNIKQ9UKE5 1360 aa12.39□□□□□ -0.43
SKIV2L2-201ENST00000230640 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
SKIV2L2-201ENST00000230640 KIF27Q86VH2 1401 aa12.33□□□□□ -0.44
SKIV2L2-201ENST00000230640 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
SKIV2L2-201ENST00000230640 FBLN2P98095 1184 aa12.32□□□□□ -0.44
SKIV2L2-201ENST00000230640 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
SKIV2L2-201ENST00000230640 ARID3CA6NKF2 412 aa12.24□□□□□ -0.45
SKIV2L2-201ENST00000230640 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
SKIV2L2-201ENST00000230640 CUX2O14529 1486 aa12.21□□□□□ -0.45
SKIV2L2-201ENST00000230640 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
SKIV2L2-201ENST00000230640 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
SKIV2L2-201ENST00000230640 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
SKIV2L2-201ENST00000230640 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
SKIV2L2-201ENST00000230640 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
SKIV2L2-201ENST00000230640 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
SKIV2L2-201ENST00000230640 TRIM52Q96A61 297 aa12.16□□□□□ -0.46
SKIV2L2-201ENST00000230640 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
SKIV2L2-201ENST00000230640 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
SKIV2L2-201ENST00000230640 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
SKIV2L2-201ENST00000230640 RAPGEF2Q9Y4G8 1499 aa12.12□□□□□ -0.47
SKIV2L2-201ENST00000230640 UNC13AQ9UPW8 1703 aa12.1□□□□□ -0.47
SKIV2L2-201ENST00000230640 MTUS2Q5JR59 1369 aa12.1□□□□□ -0.47
SKIV2L2-201ENST00000230640 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
SKIV2L2-201ENST00000230640 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
SKIV2L2-201ENST00000230640 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
SKIV2L2-201ENST00000230640 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
SKIV2L2-201ENST00000230640 POLR3GLQ9BT43 218 aa12.04□□□□□ -0.48
SKIV2L2-201ENST00000230640 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
SKIV2L2-201ENST00000230640 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
SKIV2L2-201ENST00000230640 FANCD2Q9BXW9 1451 aa12.04□□□□□ -0.48
SKIV2L2-201ENST00000230640 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
SKIV2L2-201ENST00000230640 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
SKIV2L2-201ENST00000230640 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
SKIV2L2-201ENST00000230640 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
SKIV2L2-201ENST00000230640 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
SKIV2L2-201ENST00000230640 CHIC2Q9UKJ5 165 aa12□□□□□ -0.49
SKIV2L2-201ENST00000230640 CFTRP13569 1480 aa12□□□□□ -0.49
SKIV2L2-201ENST00000230640 NEFLP07196 543 aa11.98□□□□□ -0.49
SKIV2L2-201ENST00000230640 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
SKIV2L2-201ENST00000230640 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
SKIV2L2-201ENST00000230640 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
SKIV2L2-201ENST00000230640 CNGB1Q14028 1251 aaPredicted RBP11.97□□□□□ -0.49
SKIV2L2-201ENST00000230640 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
SKIV2L2-201ENST00000230640 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
SKIV2L2-201ENST00000230640 IGF1RP08069 1367 aa11.94□□□□□ -0.5
SKIV2L2-201ENST00000230640 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms