RNA–Protein interactions for RNA: ENST00000419215.2

ZNF655-207, Transcript of zinc finger protein 655, humanhuman

TSL 1 (best)

Gene ZNF655, Length 4,346 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF655-207ENST00000419215 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.12
ZNF655-207ENST00000419215 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
ZNF655-207ENST00000419215 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
ZNF655-207ENST00000419215 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
ZNF655-207ENST00000419215 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
ZNF655-207ENST00000419215 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
ZNF655-207ENST00000419215 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
ZNF655-207ENST00000419215 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
ZNF655-207ENST00000419215 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
ZNF655-207ENST00000419215 ABCC9O60706 1549 aa12.74□□□□□ -0.37
ZNF655-207ENST00000419215 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
ZNF655-207ENST00000419215 MYO15BQ96JP2 1530 aa12.69□□□□□ -0.38
ZNF655-207ENST00000419215 NACADO15069 1562 aa12.65□□□□□ -0.38
ZNF655-207ENST00000419215 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
ZNF655-207ENST00000419215 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
ZNF655-207ENST00000419215 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
ZNF655-207ENST00000419215 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
ZNF655-207ENST00000419215 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
ZNF655-207ENST00000419215 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
ZNF655-207ENST00000419215 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.42
ZNF655-207ENST00000419215 HRCP23327 699 aa12.44□□□□□ -0.42
ZNF655-207ENST00000419215 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
ZNF655-207ENST00000419215 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
ZNF655-207ENST00000419215 BAZ1AQ9NRL2 1556 aaPredicted RBP12.31□□□□□ -0.44
ZNF655-207ENST00000419215 APLP2Q06481 763 aa12.3□□□□□ -0.44
ZNF655-207ENST00000419215 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
ZNF655-207ENST00000419215 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
ZNF655-207ENST00000419215 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
ZNF655-207ENST00000419215 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
ZNF655-207ENST00000419215 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
ZNF655-207ENST00000419215 EEA1Q15075 1411 aa12.11□□□□□ -0.47
ZNF655-207ENST00000419215 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
ZNF655-207ENST00000419215 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
ZNF655-207ENST00000419215 WIZO95785 1651 aa12.06□□□□□ -0.48
ZNF655-207ENST00000419215 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
ZNF655-207ENST00000419215 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
ZNF655-207ENST00000419215 PPARGC1BQ86YN6 1023 aaKnown RBP11.99□□□□□ -0.49
ZNF655-207ENST00000419215 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
ZNF655-207ENST00000419215 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
ZNF655-207ENST00000419215 PHF23Q9BUL5 403 aaPredicted RBP11.97□□□□□ -0.49
ZNF655-207ENST00000419215 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.5
ZNF655-207ENST00000419215 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
ZNF655-207ENST00000419215 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
ZNF655-207ENST00000419215 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
ZNF655-207ENST00000419215 GOLGA3Q08378 1498 aa11.92□□□□□ -0.5
ZNF655-207ENST00000419215 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
ZNF655-207ENST00000419215 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
ZNF655-207ENST00000419215 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
ZNF655-207ENST00000419215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
ZNF655-207ENST00000419215 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
ZNF655-207ENST00000419215 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
ZNF655-207ENST00000419215 CLIP1P30622 1438 aa11.79□□□□□ -0.52
ZNF655-207ENST00000419215 SOGA1O94964 1423 aa11.78□□□□□ -0.52
ZNF655-207ENST00000419215 HNRNPUL2Q1KMD3 747 aaKnown RBP11.78□□□□□ -0.52
ZNF655-207ENST00000419215 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
ZNF655-207ENST00000419215 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
ZNF655-207ENST00000419215 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
ZNF655-207ENST00000419215 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.54
ZNF655-207ENST00000419215 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
ZNF655-207ENST00000419215 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
ZNF655-207ENST00000419215 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
ZNF655-207ENST00000419215 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
ZNF655-207ENST00000419215 NCAPD3P42695 1498 aa11.66□□□□□ -0.54
ZNF655-207ENST00000419215 VPS8Q8N3P4 1428 aa11.65□□□□□ -0.55
ZNF655-207ENST00000419215 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
ZNF655-207ENST00000419215 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
ZNF655-207ENST00000419215 HMGXB3Q12766 1538 aa11.62□□□□□ -0.55
ZNF655-207ENST00000419215 KIF21BO75037 1637 aa11.6□□□□□ -0.55
ZNF655-207ENST00000419215 ITGAEP38570 1179 aa11.58□□□□□ -0.56
ZNF655-207ENST00000419215 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
ZNF655-207ENST00000419215 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
ZNF655-207ENST00000419215 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
ZNF655-207ENST00000419215 CLSPNQ9HAW4 1339 aa11.54□□□□□ -0.56
ZNF655-207ENST00000419215 CUX2O14529 1486 aa11.53□□□□□ -0.56
ZNF655-207ENST00000419215 RAPGEF2Q9Y4G8 1499 aa11.53□□□□□ -0.56
ZNF655-207ENST00000419215 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.56
ZNF655-207ENST00000419215 TOP2BQ02880 1626 aa11.52□□□□□ -0.56
ZNF655-207ENST00000419215 ERICH3Q5RHP9 1530 aa11.51□□□□□ -0.57
ZNF655-207ENST00000419215 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
ZNF655-207ENST00000419215 CFTRP13569 1480 aa11.5□□□□□ -0.57
ZNF655-207ENST00000419215 FHAD1B1AJZ9 1412 aa11.49□□□□□ -0.57
ZNF655-207ENST00000419215 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.57
ZNF655-207ENST00000419215 P3H3Q8IVL6 736 aa11.44□□□□□ -0.58
ZNF655-207ENST00000419215 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
ZNF655-207ENST00000419215 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
ZNF655-207ENST00000419215 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
ZNF655-207ENST00000419215 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
ZNF655-207ENST00000419215 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
ZNF655-207ENST00000419215 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
ZNF655-207ENST00000419215 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
ZNF655-207ENST00000419215 CUX1P39880 1505 aa11.38□□□□□ -0.59
ZNF655-207ENST00000419215 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
ZNF655-207ENST00000419215 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
ZNF655-207ENST00000419215 IGF1RP08069 1367 aa11.35□□□□□ -0.59
ZNF655-207ENST00000419215 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
ZNF655-207ENST00000419215 NEFLP07196 543 aa11.33□□□□□ -0.6
ZNF655-207ENST00000419215 NEUROD1Q13562 356 aa11.33□□□□□ -0.6
ZNF655-207ENST00000419215 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
ZNF655-207ENST00000419215 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
ZNF655-207ENST00000419215 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms