RNA–Protein interactions for RNA: ENST00000418678.5

ATP11A-204, Transcript of ATPase phospholipid transporting 11A, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ATP11A, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-204ENST00000418678 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
ATP11A-204ENST00000418678 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
ATP11A-204ENST00000418678 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
ATP11A-204ENST00000418678 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
ATP11A-204ENST00000418678 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
ATP11A-204ENST00000418678 ZCCHC6Q5VYS8 1495 aaKnown RBP14.2□□□□□ -0.14
ATP11A-204ENST00000418678 ABCC9O60706 1549 aa14.19□□□□□ -0.14
ATP11A-204ENST00000418678 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
ATP11A-204ENST00000418678 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
ATP11A-204ENST00000418678 NACADO15069 1562 aa13.97□□□□□ -0.17
ATP11A-204ENST00000418678 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
ATP11A-204ENST00000418678 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
ATP11A-204ENST00000418678 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
ATP11A-204ENST00000418678 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
ATP11A-204ENST00000418678 SENP3Q9H4L4 574 aaPredicted RBP13.5□□□□□ -0.25
ATP11A-204ENST00000418678 BICRAQ9NZM4 1560 aa13.5□□□□□ -0.25
ATP11A-204ENST00000418678 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
ATP11A-204ENST00000418678 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATP11A-204ENST00000418678 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
ATP11A-204ENST00000418678 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
ATP11A-204ENST00000418678 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
ATP11A-204ENST00000418678 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
ATP11A-204ENST00000418678 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
ATP11A-204ENST00000418678 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
ATP11A-204ENST00000418678 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
ATP11A-204ENST00000418678 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
ATP11A-204ENST00000418678 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
ATP11A-204ENST00000418678 ADRA2BP18089 450 aa12.98□□□□□ -0.33
ATP11A-204ENST00000418678 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
ATP11A-204ENST00000418678 WIZO95785 1651 aa12.94□□□□□ -0.34
ATP11A-204ENST00000418678 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
ATP11A-204ENST00000418678 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
ATP11A-204ENST00000418678 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
ATP11A-204ENST00000418678 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
ATP11A-204ENST00000418678 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
ATP11A-204ENST00000418678 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
ATP11A-204ENST00000418678 FOXD1Q16676 465 aa12.8□□□□□ -0.36
ATP11A-204ENST00000418678 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
ATP11A-204ENST00000418678 HRCP23327 699 aa12.75□□□□□ -0.37
ATP11A-204ENST00000418678 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
ATP11A-204ENST00000418678 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
ATP11A-204ENST00000418678 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
ATP11A-204ENST00000418678 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
ATP11A-204ENST00000418678 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
ATP11A-204ENST00000418678 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
ATP11A-204ENST00000418678 CFTRP13569 1480 aa12.5□□□□□ -0.41
ATP11A-204ENST00000418678 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
ATP11A-204ENST00000418678 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.42
ATP11A-204ENST00000418678 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
ATP11A-204ENST00000418678 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
ATP11A-204ENST00000418678 NESP48681 1621 aa12.41□□□□□ -0.42
ATP11A-204ENST00000418678 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
ATP11A-204ENST00000418678 KCNA4P22459 653 aa12.36□□□□□ -0.43
ATP11A-204ENST00000418678 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
ATP11A-204ENST00000418678 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
ATP11A-204ENST00000418678 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
ATP11A-204ENST00000418678 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
ATP11A-204ENST00000418678 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
ATP11A-204ENST00000418678 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
ATP11A-204ENST00000418678 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
ATP11A-204ENST00000418678 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
ATP11A-204ENST00000418678 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
ATP11A-204ENST00000418678 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
ATP11A-204ENST00000418678 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
ATP11A-204ENST00000418678 CUX1P39880 1505 aa12.22□□□□□ -0.45
ATP11A-204ENST00000418678 WDR62O43379 1518 aa12.21□□□□□ -0.45
ATP11A-204ENST00000418678 WRNQ14191 1432 aaPredicted RBP eCLIP12.21□□□□□ -0.45
ATP11A-204ENST00000418678 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
ATP11A-204ENST00000418678 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
ATP11A-204ENST00000418678 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
ATP11A-204ENST00000418678 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
ATP11A-204ENST00000418678 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
ATP11A-204ENST00000418678 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
ATP11A-204ENST00000418678 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
ATP11A-204ENST00000418678 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
ATP11A-204ENST00000418678 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
ATP11A-204ENST00000418678 TARBP1Q13395 1621 aaKnown RBP12.09□□□□□ -0.47
ATP11A-204ENST00000418678 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
ATP11A-204ENST00000418678 CUX2O14529 1486 aa12.07□□□□□ -0.48
ATP11A-204ENST00000418678 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
ATP11A-204ENST00000418678 EEA1Q15075 1411 aa12.03□□□□□ -0.48
ATP11A-204ENST00000418678 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.48
ATP11A-204ENST00000418678 IFT140Q96RY7 1462 aa12.02□□□□□ -0.49
ATP11A-204ENST00000418678 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
ATP11A-204ENST00000418678 SOGA1O94964 1423 aa12□□□□□ -0.49
ATP11A-204ENST00000418678 RAD54L2Q9Y4B4 1467 aa12□□□□□ -0.49
ATP11A-204ENST00000418678 MYT1Q01538 1121 aa11.97□□□□□ -0.49
ATP11A-204ENST00000418678 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
ATP11A-204ENST00000418678 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
ATP11A-204ENST00000418678 KIF21BO75037 1637 aa11.93□□□□□ -0.5
ATP11A-204ENST00000418678 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
ATP11A-204ENST00000418678 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
ATP11A-204ENST00000418678 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
ATP11A-204ENST00000418678 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
ATP11A-204ENST00000418678 ZEB1P37275 1124 aaPredicted RBP11.9□□□□□ -0.5
ATP11A-204ENST00000418678 GAPVD1Q14C86 1478 aa11.9□□□□□ -0.51
ATP11A-204ENST00000418678 CUL7Q14999 1698 aa11.89□□□□□ -0.51
ATP11A-204ENST00000418678 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
ATP11A-204ENST00000418678 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.513e-9■■■■□ 24.8
ATP11A-204ENST00000418678 TDRD9Q8NDG6 1382 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms