RNA–Protein interactions for RNA: ENST00000373620.7

DENND1A-202, Transcript of DENN domain containing 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1A, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-202ENST00000373620 NISCHQ9Y2I1 1504 aa33.7■■■□□ 2.98
DENND1A-202ENST00000373620 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
DENND1A-202ENST00000373620 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
DENND1A-202ENST00000373620 ABCC9O60706 1549 aa28.01■■■□□ 2.07
DENND1A-202ENST00000373620 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
DENND1A-202ENST00000373620 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
DENND1A-202ENST00000373620 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
DENND1A-202ENST00000373620 PPARGC1BQ86YN6 1023 aaKnown RBP27.51■■□□□ 1.99
DENND1A-202ENST00000373620 MYO15BQ96JP2 1530 aa27.47■■□□□ 1.99
DENND1A-202ENST00000373620 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
DENND1A-202ENST00000373620 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
DENND1A-202ENST00000373620 NACADO15069 1562 aa27.39■■□□□ 1.97
DENND1A-202ENST00000373620 HRCP23327 699 aa27.29■■□□□ 1.96
DENND1A-202ENST00000373620 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
DENND1A-202ENST00000373620 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
DENND1A-202ENST00000373620 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
DENND1A-202ENST00000373620 PELP1Q8IZL8 1130 aaKnown RBP26.49■■□□□ 1.83
DENND1A-202ENST00000373620 BICRAQ9NZM4 1560 aa26.44■■□□□ 1.82
DENND1A-202ENST00000373620 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
DENND1A-202ENST00000373620 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
DENND1A-202ENST00000373620 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
DENND1A-202ENST00000373620 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
DENND1A-202ENST00000373620 SCAF1Q9H7N4 1312 aaKnown RBP26.2■■□□□ 1.78
DENND1A-202ENST00000373620 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
DENND1A-202ENST00000373620 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
DENND1A-202ENST00000373620 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
DENND1A-202ENST00000373620 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
DENND1A-202ENST00000373620 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
DENND1A-202ENST00000373620 WIZO95785 1651 aa25.86■■□□□ 1.73
DENND1A-202ENST00000373620 TRIM26Q12899 539 aaPredicted RBP25.74■■□□□ 1.71
DENND1A-202ENST00000373620 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
DENND1A-202ENST00000373620 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.7
DENND1A-202ENST00000373620 GTF3C3Q9Y5Q9 886 aa25.61■■□□□ 1.69
DENND1A-202ENST00000373620 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
DENND1A-202ENST00000373620 YTHDC1Q96MU7 727 aaKnown RBP25.56■■□□□ 1.68
DENND1A-202ENST00000373620 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
DENND1A-202ENST00000373620 NEUROD1Q13562 356 aa25.54■■□□□ 1.68
DENND1A-202ENST00000373620 TTBK1Q5TCY1 1321 aaPredicted RBP25.54■■□□□ 1.68
DENND1A-202ENST00000373620 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
DENND1A-202ENST00000373620 SMARCA2P51531 1590 aa25.47■■□□□ 1.67
DENND1A-202ENST00000373620 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
DENND1A-202ENST00000373620 ACIN1Q9UKV3 1341 aaKnown RBP25.39■■□□□ 1.65
DENND1A-202ENST00000373620 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
DENND1A-202ENST00000373620 MYT1Q01538 1121 aa25.37■■□□□ 1.65
DENND1A-202ENST00000373620 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
DENND1A-202ENST00000373620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.31■■□□□ 1.64
DENND1A-202ENST00000373620 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
DENND1A-202ENST00000373620 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
DENND1A-202ENST00000373620 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
DENND1A-202ENST00000373620 CCER1Q8TC90 406 aaPredicted RBP25.27■■□□□ 1.64
DENND1A-202ENST00000373620 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
DENND1A-202ENST00000373620 DIEXFQ68CQ4 756 aaKnown RBP25.09■■□□□ 1.61
DENND1A-202ENST00000373620 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
DENND1A-202ENST00000373620 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
DENND1A-202ENST00000373620 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
DENND1A-202ENST00000373620 CFTRP13569 1480 aa24.73■■□□□ 1.55
DENND1A-202ENST00000373620 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
DENND1A-202ENST00000373620 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
DENND1A-202ENST00000373620 NESP48681 1621 aa24.57■■□□□ 1.52
DENND1A-202ENST00000373620 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
DENND1A-202ENST00000373620 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
DENND1A-202ENST00000373620 LAMC3Q9Y6N6 1575 aa24.45■■□□□ 1.5
DENND1A-202ENST00000373620 MIER1Q8N108 512 aa24.42■■□□□ 1.5
DENND1A-202ENST00000373620 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
DENND1A-202ENST00000373620 BCANQ96GW7 911 aa24.4■■□□□ 1.5
DENND1A-202ENST00000373620 BCL11AQ9H165 835 aa24.4■■□□□ 1.5
DENND1A-202ENST00000373620 CUX1P39880 1505 aa24.38■■□□□ 1.49
DENND1A-202ENST00000373620 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
DENND1A-202ENST00000373620 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
DENND1A-202ENST00000373620 SOGA1O94964 1423 aa24.29■■□□□ 1.48
DENND1A-202ENST00000373620 ZNF316A6NFI3 1004 aaPredicted RBP24.29■■□□□ 1.48
DENND1A-202ENST00000373620 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
DENND1A-202ENST00000373620 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
DENND1A-202ENST00000373620 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
DENND1A-202ENST00000373620 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
DENND1A-202ENST00000373620 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
DENND1A-202ENST00000373620 RANGAP1P46060 587 aaPredicted RBP24.17■■□□□ 1.46
DENND1A-202ENST00000373620 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
DENND1A-202ENST00000373620 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
DENND1A-202ENST00000373620 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
DENND1A-202ENST00000373620 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
DENND1A-202ENST00000373620 EEA1Q15075 1411 aa24.09■■□□□ 1.45
DENND1A-202ENST00000373620 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
DENND1A-202ENST00000373620 ANP32EQ9BTT0 268 aa24.06■■□□□ 1.44
DENND1A-202ENST00000373620 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
DENND1A-202ENST00000373620 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
DENND1A-202ENST00000373620 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
DENND1A-202ENST00000373620 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
DENND1A-202ENST00000373620 CUX2O14529 1486 aa23.95■■□□□ 1.43
DENND1A-202ENST00000373620 SUPT16HQ9Y5B9 1047 aaKnown RBP23.95■■□□□ 1.42
DENND1A-202ENST00000373620 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
DENND1A-202ENST00000373620 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
DENND1A-202ENST00000373620 TSHZ2Q9NRE2 1034 aa23.9■■□□□ 1.42
DENND1A-202ENST00000373620 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
DENND1A-202ENST00000373620 WDR62O43379 1518 aa23.86■■□□□ 1.41
DENND1A-202ENST00000373620 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
DENND1A-202ENST00000373620 KIF21BO75037 1637 aa23.83■■□□□ 1.41
DENND1A-202ENST00000373620 ITGAEP38570 1179 aa23.83■■□□□ 1.4
DENND1A-202ENST00000373620 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
DENND1A-202ENST00000373620 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms