RNA–Protein interactions for RNA: ENST00000489577.1

ATP11A-213, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 5

Gene ATP11A, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-213ENST00000489577 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
ATP11A-213ENST00000489577 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
ATP11A-213ENST00000489577 ABCC9O60706 1549 aa21.89■■□□□ 1.09
ATP11A-213ENST00000489577 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
ATP11A-213ENST00000489577 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
ATP11A-213ENST00000489577 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
ATP11A-213ENST00000489577 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
ATP11A-213ENST00000489577 NACADO15069 1562 aa21.38■■□□□ 1.01
ATP11A-213ENST00000489577 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
ATP11A-213ENST00000489577 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
ATP11A-213ENST00000489577 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
ATP11A-213ENST00000489577 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
ATP11A-213ENST00000489577 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
ATP11A-213ENST00000489577 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
ATP11A-213ENST00000489577 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
ATP11A-213ENST00000489577 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
ATP11A-213ENST00000489577 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
ATP11A-213ENST00000489577 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
ATP11A-213ENST00000489577 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
ATP11A-213ENST00000489577 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
ATP11A-213ENST00000489577 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
ATP11A-213ENST00000489577 WIZO95785 1651 aa19.87■□□□□ 0.77
ATP11A-213ENST00000489577 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
ATP11A-213ENST00000489577 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
ATP11A-213ENST00000489577 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
ATP11A-213ENST00000489577 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
ATP11A-213ENST00000489577 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
ATP11A-213ENST00000489577 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
ATP11A-213ENST00000489577 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
ATP11A-213ENST00000489577 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
ATP11A-213ENST00000489577 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
ATP11A-213ENST00000489577 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
ATP11A-213ENST00000489577 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
ATP11A-213ENST00000489577 CFTRP13569 1480 aa19.23■□□□□ 0.67
ATP11A-213ENST00000489577 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
ATP11A-213ENST00000489577 NESP48681 1621 aa19.11■□□□□ 0.65
ATP11A-213ENST00000489577 LAMC3Q9Y6N6 1575 aa19.09■□□□□ 0.65
ATP11A-213ENST00000489577 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
ATP11A-213ENST00000489577 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
ATP11A-213ENST00000489577 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
ATP11A-213ENST00000489577 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
ATP11A-213ENST00000489577 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
ATP11A-213ENST00000489577 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
ATP11A-213ENST00000489577 CEP164Q9UPV0 1460 aa18.88■□□□□ 0.61
ATP11A-213ENST00000489577 CUX1P39880 1505 aa18.82■□□□□ 0.6
ATP11A-213ENST00000489577 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
ATP11A-213ENST00000489577 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
ATP11A-213ENST00000489577 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
ATP11A-213ENST00000489577 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
ATP11A-213ENST00000489577 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
ATP11A-213ENST00000489577 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
ATP11A-213ENST00000489577 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
ATP11A-213ENST00000489577 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
ATP11A-213ENST00000489577 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
ATP11A-213ENST00000489577 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
ATP11A-213ENST00000489577 WDR62O43379 1518 aa18.64■□□□□ 0.57
ATP11A-213ENST00000489577 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
ATP11A-213ENST00000489577 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
ATP11A-213ENST00000489577 SOGA1O94964 1423 aa18.61■□□□□ 0.57
ATP11A-213ENST00000489577 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
ATP11A-213ENST00000489577 CUX2O14529 1486 aa18.54■□□□□ 0.56
ATP11A-213ENST00000489577 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
ATP11A-213ENST00000489577 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
ATP11A-213ENST00000489577 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
ATP11A-213ENST00000489577 EEA1Q15075 1411 aa18.51■□□□□ 0.55
ATP11A-213ENST00000489577 CSRNP3Q8WYN3 585 aa18.49■□□□□ 0.55
ATP11A-213ENST00000489577 KIF27Q86VH2 1401 aa18.49■□□□□ 0.55
ATP11A-213ENST00000489577 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
ATP11A-213ENST00000489577 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
ATP11A-213ENST00000489577 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
ATP11A-213ENST00000489577 IGF1RP08069 1367 aa18.42■□□□□ 0.54
ATP11A-213ENST00000489577 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
ATP11A-213ENST00000489577 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.53
ATP11A-213ENST00000489577 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
ATP11A-213ENST00000489577 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
ATP11A-213ENST00000489577 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
ATP11A-213ENST00000489577 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
ATP11A-213ENST00000489577 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
ATP11A-213ENST00000489577 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
ATP11A-213ENST00000489577 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
ATP11A-213ENST00000489577 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
ATP11A-213ENST00000489577 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
ATP11A-213ENST00000489577 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
ATP11A-213ENST00000489577 KIF21BO75037 1637 aa18.21■□□□□ 0.51
ATP11A-213ENST00000489577 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
ATP11A-213ENST00000489577 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
ATP11A-213ENST00000489577 FHAD1B1AJZ9 1412 aa18.18■□□□□ 0.5
ATP11A-213ENST00000489577 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
ATP11A-213ENST00000489577 CUL7Q14999 1698 aa18.16■□□□□ 0.5
ATP11A-213ENST00000489577 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
ATP11A-213ENST00000489577 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
ATP11A-213ENST00000489577 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
ATP11A-213ENST00000489577 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
ATP11A-213ENST00000489577 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
ATP11A-213ENST00000489577 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
ATP11A-213ENST00000489577 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
ATP11A-213ENST00000489577 FBLN2P98095 1184 aa18.05■□□□□ 0.48
ATP11A-213ENST00000489577 GRIN2AQ12879 1464 aa18.02■□□□□ 0.48
ATP11A-213ENST00000489577 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
ATP11A-213ENST00000489577 NUP160Q12769 1436 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms