Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ABHD17AP5-201ENST00000580133 923 ntBASIC35.1■■■■□ 3.21
CSB-PGBD3P0DP91 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.09■■■■□ 3.21
CSB-PGBD3P0DP91 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.09■■■■□ 3.21
CSB-PGBD3P0DP91 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
CSB-PGBD3P0DP91 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
CSB-PGBD3P0DP91 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CSB-PGBD3P0DP91 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CSB-PGBD3P0DP91 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CSB-PGBD3P0DP91 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CSB-PGBD3P0DP91 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CSB-PGBD3P0DP91 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CSB-PGBD3P0DP91 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CSB-PGBD3P0DP91 AL161658.1-201ENST00000623641 1967 ntBASIC35.06■■■■□ 3.2
CSB-PGBD3P0DP91 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC35.06■■■■□ 3.2
CSB-PGBD3P0DP91 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC35.05■■■■□ 3.2
CSB-PGBD3P0DP91 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
CSB-PGBD3P0DP91 LINC00273-201ENST00000539813 1452 ntBASIC35.04■■■■□ 3.2
CSB-PGBD3P0DP91 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CSB-PGBD3P0DP91 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CSB-PGBD3P0DP91 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC35.03■■■■□ 3.2
CSB-PGBD3P0DP91 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC35.03■■■■□ 3.2
CSB-PGBD3P0DP91 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC35.02■■■■□ 3.2
CSB-PGBD3P0DP91 CEP120-209ENST00000515110 606 ntTSL 3 BASIC35.02■■■■□ 3.2
CSB-PGBD3P0DP91 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC35.02■■■■□ 3.2
CSB-PGBD3P0DP91 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
CSB-PGBD3P0DP91 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CSB-PGBD3P0DP91 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
CSB-PGBD3P0DP91 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.2
CSB-PGBD3P0DP91 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC35.01■■■■□ 3.2
CSB-PGBD3P0DP91 RNF126P1-201ENST00000567452 1320 ntBASIC35■■■■□ 3.19
CSB-PGBD3P0DP91 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CSB-PGBD3P0DP91 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CSB-PGBD3P0DP91 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CSB-PGBD3P0DP91 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC34.97■■■■□ 3.19
CSB-PGBD3P0DP91 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.96■■■■□ 3.19
CSB-PGBD3P0DP91 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC34.95■■■■□ 3.18
CSB-PGBD3P0DP91 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
CSB-PGBD3P0DP91 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CSB-PGBD3P0DP91 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CSB-PGBD3P0DP91 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC34.93■■■■□ 3.18
CSB-PGBD3P0DP91 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CSB-PGBD3P0DP91 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
CSB-PGBD3P0DP91 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CSB-PGBD3P0DP91 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC34.9■■■■□ 3.18
CSB-PGBD3P0DP91 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
CSB-PGBD3P0DP91 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CSB-PGBD3P0DP91 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CSB-PGBD3P0DP91 AC010864.1-201ENST00000609407 1511 ntBASIC34.89■■■■□ 3.18
CSB-PGBD3P0DP91 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
CSB-PGBD3P0DP91 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
CSB-PGBD3P0DP91 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC34.88■■■■□ 3.17
CSB-PGBD3P0DP91 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CSB-PGBD3P0DP91 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.86■■■■□ 3.17
CSB-PGBD3P0DP91 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CSB-PGBD3P0DP91 AC022413.1-201ENST00000624602 984 ntBASIC34.85■■■■□ 3.17
CSB-PGBD3P0DP91 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CSB-PGBD3P0DP91 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CSB-PGBD3P0DP91 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CSB-PGBD3P0DP91 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
CSB-PGBD3P0DP91 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
CSB-PGBD3P0DP91 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC34.82■■■■□ 3.16
CSB-PGBD3P0DP91 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CSB-PGBD3P0DP91 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.81■■■■□ 3.16
CSB-PGBD3P0DP91 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
CSB-PGBD3P0DP91 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CSB-PGBD3P0DP91 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
CSB-PGBD3P0DP91 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CSB-PGBD3P0DP91 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.79■■■■□ 3.16
CSB-PGBD3P0DP91 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC34.79■■■■□ 3.16
CSB-PGBD3P0DP91 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC34.79■■■■□ 3.16
CSB-PGBD3P0DP91 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CSB-PGBD3P0DP91 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CSB-PGBD3P0DP91 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CSB-PGBD3P0DP91 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CSB-PGBD3P0DP91 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.76■■■■□ 3.16
CSB-PGBD3P0DP91 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC34.76■■■■□ 3.16
CSB-PGBD3P0DP91 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.16
CSB-PGBD3P0DP91 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CSB-PGBD3P0DP91 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.75■■■■□ 3.15
CSB-PGBD3P0DP91 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC34.74■■■■□ 3.15
CSB-PGBD3P0DP91 NTF6A-201ENST00000591175 560 ntBASIC34.73■■■■□ 3.15
CSB-PGBD3P0DP91 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CSB-PGBD3P0DP91 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CSB-PGBD3P0DP91 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CSB-PGBD3P0DP91 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CSB-PGBD3P0DP91 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
CSB-PGBD3P0DP91 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CSB-PGBD3P0DP91 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CSB-PGBD3P0DP91 AC008813.1-201ENST00000536597 885 ntBASIC34.7■■■■□ 3.15
CSB-PGBD3P0DP91 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CSB-PGBD3P0DP91 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.69■■■■□ 3.14
CSB-PGBD3P0DP91 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC34.69■■■■□ 3.14
CSB-PGBD3P0DP91 HES4-202ENST00000428771 1040 ntTSL 2 BASIC34.67■■■■□ 3.14
CSB-PGBD3P0DP91 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
CSB-PGBD3P0DP91 AC012354.3-201ENST00000623734 483 ntBASIC34.67■■■■□ 3.14
CSB-PGBD3P0DP91 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CSB-PGBD3P0DP91 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
CSB-PGBD3P0DP91 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CSB-PGBD3P0DP91 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CSB-PGBD3P0DP91 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms