Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFTA3P0C7M3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFTA3P0C7M3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFTA3P0C7M3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.73■□□□□ 0.91
SFTA3P0C7M3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.73■□□□□ 0.91
SFTA3P0C7M3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFTA3P0C7M3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.72■□□□□ 0.91
SFTA3P0C7M3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.72■□□□□ 0.91
SFTA3P0C7M3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SFTA3P0C7M3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SFTA3P0C7M3 AL139393.2-201ENST00000608721 2025 ntBASIC20.71■□□□□ 0.91
SFTA3P0C7M3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTA3P0C7M3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.7■□□□□ 0.9
SFTA3P0C7M3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.7■□□□□ 0.9
SFTA3P0C7M3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTA3P0C7M3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SFTA3P0C7M3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTA3P0C7M3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTA3P0C7M3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.69■□□□□ 0.9
SFTA3P0C7M3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTA3P0C7M3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SFTA3P0C7M3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.68■□□□□ 0.9
SFTA3P0C7M3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SFTA3P0C7M3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SFTA3P0C7M3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SFTA3P0C7M3 AL135925.1-201ENST00000605920 1701 ntBASIC20.67■□□□□ 0.9
SFTA3P0C7M3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTA3P0C7M3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTA3P0C7M3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTA3P0C7M3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SFTA3P0C7M3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SFTA3P0C7M3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.65■□□□□ 0.9
SFTA3P0C7M3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SFTA3P0C7M3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTA3P0C7M3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SFTA3P0C7M3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SFTA3P0C7M3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SFTA3P0C7M3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.64■□□□□ 0.89
SFTA3P0C7M3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTA3P0C7M3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SFTA3P0C7M3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SFTA3P0C7M3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTA3P0C7M3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTA3P0C7M3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SFTA3P0C7M3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SFTA3P0C7M3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SFTA3P0C7M3 AC093323.1-202ENST00000635031 2045 ntBASIC20.6■□□□□ 0.89
SFTA3P0C7M3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.6■□□□□ 0.89
SFTA3P0C7M3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SFTA3P0C7M3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.59■□□□□ 0.89
SFTA3P0C7M3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SFTA3P0C7M3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SFTA3P0C7M3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SFTA3P0C7M3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SFTA3P0C7M3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SFTA3P0C7M3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SFTA3P0C7M3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SFTA3P0C7M3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SFTA3P0C7M3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.57■□□□□ 0.88
SFTA3P0C7M3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SFTA3P0C7M3 BX255925.1-201ENST00000566954 1854 ntBASIC20.56■□□□□ 0.88
SFTA3P0C7M3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SFTA3P0C7M3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SFTA3P0C7M3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SFTA3P0C7M3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SFTA3P0C7M3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTA3P0C7M3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTA3P0C7M3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTA3P0C7M3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTA3P0C7M3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SFTA3P0C7M3 AC020928.2-201ENST00000588717 2197 ntBASIC20.52■□□□□ 0.88
SFTA3P0C7M3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SFTA3P0C7M3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SFTA3P0C7M3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SFTA3P0C7M3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
SFTA3P0C7M3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTA3P0C7M3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTA3P0C7M3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTA3P0C7M3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SFTA3P0C7M3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms