Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASQ2O14958 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CASQ2O14958 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CASQ2O14958 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CASQ2O14958 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CASQ2O14958 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CASQ2O14958 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CASQ2O14958 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.63■■□□□ 1.53
CASQ2O14958 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC24.62■■□□□ 1.53
CASQ2O14958 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASQ2O14958 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.61■■□□□ 1.53
CASQ2O14958 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
CASQ2O14958 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CASQ2O14958 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASQ2O14958 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASQ2O14958 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CASQ2O14958 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASQ2O14958 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.59■■□□□ 1.53
CASQ2O14958 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASQ2O14958 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CASQ2O14958 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CASQ2O14958 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CASQ2O14958 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASQ2O14958 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CASQ2O14958 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CASQ2O14958 BX255925.1-201ENST00000566954 1854 ntBASIC24.56■■□□□ 1.52
CASQ2O14958 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CASQ2O14958 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.55■■□□□ 1.52
CASQ2O14958 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.55■■□□□ 1.52
CASQ2O14958 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASQ2O14958 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASQ2O14958 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CASQ2O14958 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASQ2O14958 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASQ2O14958 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CASQ2O14958 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASQ2O14958 AL449106.1-201ENST00000608517 1980 ntBASIC24.53■■□□□ 1.52
CASQ2O14958 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASQ2O14958 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CASQ2O14958 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASQ2O14958 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.53■■□□□ 1.52
CASQ2O14958 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASQ2O14958 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASQ2O14958 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASQ2O14958 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASQ2O14958 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASQ2O14958 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASQ2O14958 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
CASQ2O14958 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.51■■□□□ 1.51
CASQ2O14958 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CASQ2O14958 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CASQ2O14958 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.5■■□□□ 1.51
CASQ2O14958 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASQ2O14958 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASQ2O14958 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASQ2O14958 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CASQ2O14958 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CASQ2O14958 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CASQ2O14958 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.48■■□□□ 1.51
CASQ2O14958 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CASQ2O14958 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.47■■□□□ 1.51
CASQ2O14958 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASQ2O14958 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CASQ2O14958 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASQ2O14958 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CASQ2O14958 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASQ2O14958 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASQ2O14958 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CASQ2O14958 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CASQ2O14958 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CASQ2O14958 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.44■■□□□ 1.5
CASQ2O14958 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.44■■□□□ 1.5
CASQ2O14958 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASQ2O14958 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASQ2O14958 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CASQ2O14958 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASQ2O14958 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.42■■□□□ 1.5
CASQ2O14958 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASQ2O14958 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASQ2O14958 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASQ2O14958 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.4■■□□□ 1.5
CASQ2O14958 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.39■■□□□ 1.5
CASQ2O14958 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CASQ2O14958 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CASQ2O14958 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
CASQ2O14958 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CASQ2O14958 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.38■■□□□ 1.49
CASQ2O14958 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.38■■□□□ 1.49
CASQ2O14958 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CASQ2O14958 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASQ2O14958 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.37■■□□□ 1.49
CASQ2O14958 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CASQ2O14958 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASQ2O14958 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASQ2O14958 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASQ2O14958 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASQ2O14958 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASQ2O14958 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASQ2O14958 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.35■■□□□ 1.49
CASQ2O14958 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms