Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMIM35A0A1B0GVV1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.85■■■□□ 2.21
SMIM35A0A1B0GVV1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.85■■■□□ 2.21
SMIM35A0A1B0GVV1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMIM35A0A1B0GVV1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMIM35A0A1B0GVV1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
SMIM35A0A1B0GVV1 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.82■■■□□ 2.2
SMIM35A0A1B0GVV1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.82■■■□□ 2.2
SMIM35A0A1B0GVV1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SMIM35A0A1B0GVV1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
SMIM35A0A1B0GVV1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMIM35A0A1B0GVV1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMIM35A0A1B0GVV1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SMIM35A0A1B0GVV1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.81■■■□□ 2.2
SMIM35A0A1B0GVV1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.79■■■□□ 2.2
SMIM35A0A1B0GVV1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
SMIM35A0A1B0GVV1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SMIM35A0A1B0GVV1 AL135925.1-201ENST00000605920 1701 ntBASIC28.77■■■□□ 2.2
SMIM35A0A1B0GVV1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
SMIM35A0A1B0GVV1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.77■■■□□ 2.2
SMIM35A0A1B0GVV1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.77■■■□□ 2.2
SMIM35A0A1B0GVV1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.2
SMIM35A0A1B0GVV1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMIM35A0A1B0GVV1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMIM35A0A1B0GVV1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
SMIM35A0A1B0GVV1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SMIM35A0A1B0GVV1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMIM35A0A1B0GVV1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMIM35A0A1B0GVV1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
SMIM35A0A1B0GVV1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMIM35A0A1B0GVV1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.73■■■□□ 2.19
SMIM35A0A1B0GVV1 AC127502.1-201ENST00000399971 1502 ntBASIC28.72■■■□□ 2.19
SMIM35A0A1B0GVV1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.71■■■□□ 2.19
SMIM35A0A1B0GVV1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
SMIM35A0A1B0GVV1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMIM35A0A1B0GVV1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMIM35A0A1B0GVV1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMIM35A0A1B0GVV1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMIM35A0A1B0GVV1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMIM35A0A1B0GVV1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.67■■■□□ 2.18
SMIM35A0A1B0GVV1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.66■■■□□ 2.18
SMIM35A0A1B0GVV1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMIM35A0A1B0GVV1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMIM35A0A1B0GVV1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.65■■■□□ 2.18
SMIM35A0A1B0GVV1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
SMIM35A0A1B0GVV1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
SMIM35A0A1B0GVV1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMIM35A0A1B0GVV1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMIM35A0A1B0GVV1 HSD17B1P1-201ENST00000590052 955 ntBASIC28.63■■■□□ 2.17
SMIM35A0A1B0GVV1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.62■■■□□ 2.17
SMIM35A0A1B0GVV1 AC135983.2-203ENST00000454486 1613 ntBASIC28.61■■■□□ 2.17
SMIM35A0A1B0GVV1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMIM35A0A1B0GVV1 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.58■■■□□ 2.17
SMIM35A0A1B0GVV1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SMIM35A0A1B0GVV1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.58■■■□□ 2.17
SMIM35A0A1B0GVV1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
SMIM35A0A1B0GVV1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SMIM35A0A1B0GVV1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.57■■■□□ 2.16
SMIM35A0A1B0GVV1 WHAMMP2-203ENST00000563942 1603 ntBASIC28.57■■■□□ 2.16
SMIM35A0A1B0GVV1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMIM35A0A1B0GVV1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMIM35A0A1B0GVV1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.56■■■□□ 2.16
SMIM35A0A1B0GVV1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
SMIM35A0A1B0GVV1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
SMIM35A0A1B0GVV1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.55■■■□□ 2.16
SMIM35A0A1B0GVV1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SMIM35A0A1B0GVV1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
SMIM35A0A1B0GVV1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SMIM35A0A1B0GVV1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SMIM35A0A1B0GVV1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.53■■■□□ 2.16
SMIM35A0A1B0GVV1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.53■■■□□ 2.16
SMIM35A0A1B0GVV1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
SMIM35A0A1B0GVV1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
SMIM35A0A1B0GVV1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.52■■■□□ 2.16
SMIM35A0A1B0GVV1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.52■■■□□ 2.16
SMIM35A0A1B0GVV1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SMIM35A0A1B0GVV1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SMIM35A0A1B0GVV1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.5■■■□□ 2.15
SMIM35A0A1B0GVV1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SMIM35A0A1B0GVV1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.5■■■□□ 2.15
SMIM35A0A1B0GVV1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SMIM35A0A1B0GVV1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SMIM35A0A1B0GVV1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.49■■■□□ 2.15
SMIM35A0A1B0GVV1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMIM35A0A1B0GVV1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
SMIM35A0A1B0GVV1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMIM35A0A1B0GVV1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
SMIM35A0A1B0GVV1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SMIM35A0A1B0GVV1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.47■■■□□ 2.15
SMIM35A0A1B0GVV1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms