Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.49■■□□□ 1.35
TRGV5A0A0B4J1U4 MIR4449-201ENST00000578365 66 ntBASIC23.48■■□□□ 1.35
TRGV5A0A0B4J1U4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.48■■□□□ 1.35
TRGV5A0A0B4J1U4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRGV5A0A0B4J1U4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.47■■□□□ 1.35
TRGV5A0A0B4J1U4 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.47■■□□□ 1.35
TRGV5A0A0B4J1U4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRGV5A0A0B4J1U4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRGV5A0A0B4J1U4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRGV5A0A0B4J1U4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRGV5A0A0B4J1U4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRGV5A0A0B4J1U4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRGV5A0A0B4J1U4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRGV5A0A0B4J1U4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRGV5A0A0B4J1U4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRGV5A0A0B4J1U4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.44■■□□□ 1.34
TRGV5A0A0B4J1U4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRGV5A0A0B4J1U4 AC127502.1-201ENST00000399971 1502 ntBASIC23.43■■□□□ 1.34
TRGV5A0A0B4J1U4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRGV5A0A0B4J1U4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.43■■□□□ 1.34
TRGV5A0A0B4J1U4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRGV5A0A0B4J1U4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRGV5A0A0B4J1U4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.42■■□□□ 1.34
TRGV5A0A0B4J1U4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.42■■□□□ 1.34
TRGV5A0A0B4J1U4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
TRGV5A0A0B4J1U4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.42■■□□□ 1.34
TRGV5A0A0B4J1U4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
TRGV5A0A0B4J1U4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRGV5A0A0B4J1U4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRGV5A0A0B4J1U4 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.41■■□□□ 1.34
TRGV5A0A0B4J1U4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRGV5A0A0B4J1U4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRGV5A0A0B4J1U4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.39■■□□□ 1.34
TRGV5A0A0B4J1U4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.39■■□□□ 1.33
TRGV5A0A0B4J1U4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TRGV5A0A0B4J1U4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TRGV5A0A0B4J1U4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRGV5A0A0B4J1U4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
TRGV5A0A0B4J1U4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRGV5A0A0B4J1U4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRGV5A0A0B4J1U4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRGV5A0A0B4J1U4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRGV5A0A0B4J1U4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRGV5A0A0B4J1U4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRGV5A0A0B4J1U4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.34■■□□□ 1.33
TRGV5A0A0B4J1U4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.34■■□□□ 1.33
TRGV5A0A0B4J1U4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRGV5A0A0B4J1U4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRGV5A0A0B4J1U4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.32■■□□□ 1.32
TRGV5A0A0B4J1U4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.32■■□□□ 1.32
TRGV5A0A0B4J1U4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRGV5A0A0B4J1U4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRGV5A0A0B4J1U4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.31■■□□□ 1.32
TRGV5A0A0B4J1U4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TRGV5A0A0B4J1U4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TRGV5A0A0B4J1U4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRGV5A0A0B4J1U4 AC135983.2-203ENST00000454486 1613 ntBASIC23.3■■□□□ 1.32
TRGV5A0A0B4J1U4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRGV5A0A0B4J1U4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRGV5A0A0B4J1U4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
TRGV5A0A0B4J1U4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TRGV5A0A0B4J1U4 WHAMMP2-203ENST00000563942 1603 ntBASIC23.27■■□□□ 1.32
TRGV5A0A0B4J1U4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
TRGV5A0A0B4J1U4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.27■■□□□ 1.32
TRGV5A0A0B4J1U4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
TRGV5A0A0B4J1U4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRGV5A0A0B4J1U4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRGV5A0A0B4J1U4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRGV5A0A0B4J1U4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRGV5A0A0B4J1U4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRGV5A0A0B4J1U4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRGV5A0A0B4J1U4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRGV5A0A0B4J1U4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.24■■□□□ 1.31
TRGV5A0A0B4J1U4 ST7-AS1-201ENST00000456775 1889 ntBASIC23.24■■□□□ 1.31
TRGV5A0A0B4J1U4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRGV5A0A0B4J1U4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRGV5A0A0B4J1U4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
TRGV5A0A0B4J1U4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRGV5A0A0B4J1U4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRGV5A0A0B4J1U4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRGV5A0A0B4J1U4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRGV5A0A0B4J1U4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.2■■□□□ 1.3
TRGV5A0A0B4J1U4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TRGV5A0A0B4J1U4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRGV5A0A0B4J1U4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRGV5A0A0B4J1U4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms