Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV1A0A0A0MS02 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV1A0A0A0MS02 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.7■□□□□ 0.58
TRGV1A0A0A0MS02 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV1A0A0A0MS02 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.7■□□□□ 0.58
TRGV1A0A0A0MS02 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TRGV1A0A0A0MS02 AL139393.2-201ENST00000608721 2025 ntBASIC18.69■□□□□ 0.58
TRGV1A0A0A0MS02 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.69■□□□□ 0.58
TRGV1A0A0A0MS02 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV1A0A0A0MS02 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRGV1A0A0A0MS02 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV1A0A0A0MS02 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.66■□□□□ 0.58
TRGV1A0A0A0MS02 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV1A0A0A0MS02 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.66■□□□□ 0.58
TRGV1A0A0A0MS02 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV1A0A0A0MS02 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 MIR3665-201ENST00000578708 105 ntBASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV1A0A0A0MS02 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRGV1A0A0A0MS02 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV1A0A0A0MS02 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.64■□□□□ 0.57
TRGV1A0A0A0MS02 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV1A0A0A0MS02 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.64■□□□□ 0.57
TRGV1A0A0A0MS02 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRGV1A0A0A0MS02 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
TRGV1A0A0A0MS02 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.63■□□□□ 0.57
TRGV1A0A0A0MS02 AP006261.1-201ENST00000584783 668 ntBASIC18.63■□□□□ 0.57
TRGV1A0A0A0MS02 DUX4L28-201ENST00000623687 678 ntBASIC18.63■□□□□ 0.57
TRGV1A0A0A0MS02 AC127502.1-201ENST00000399971 1502 ntBASIC18.62■□□□□ 0.57
TRGV1A0A0A0MS02 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV1A0A0A0MS02 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.61■□□□□ 0.57
TRGV1A0A0A0MS02 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV1A0A0A0MS02 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRGV1A0A0A0MS02 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV1A0A0A0MS02 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV1A0A0A0MS02 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV1A0A0A0MS02 AC108673.1-201ENST00000510422 1159 ntBASIC18.59■□□□□ 0.57
TRGV1A0A0A0MS02 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.59■□□□□ 0.57
TRGV1A0A0A0MS02 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRGV1A0A0A0MS02 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.58■□□□□ 0.57
TRGV1A0A0A0MS02 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.58■□□□□ 0.56
TRGV1A0A0A0MS02 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV1A0A0A0MS02 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRGV1A0A0A0MS02 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV1A0A0A0MS02 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV1A0A0A0MS02 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV1A0A0A0MS02 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.56■□□□□ 0.56
TRGV1A0A0A0MS02 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRGV1A0A0A0MS02 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV1A0A0A0MS02 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV1A0A0A0MS02 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV1A0A0A0MS02 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRGV1A0A0A0MS02 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV1A0A0A0MS02 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRGV1A0A0A0MS02 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV1A0A0A0MS02 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV1A0A0A0MS02 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.53■□□□□ 0.56
TRGV1A0A0A0MS02 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV1A0A0A0MS02 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRGV1A0A0A0MS02 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV1A0A0A0MS02 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV1A0A0A0MS02 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 AL162393.1-201ENST00000437852 946 ntBASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV1A0A0A0MS02 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRGV1A0A0A0MS02 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRGV1A0A0A0MS02 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV1A0A0A0MS02 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.51■□□□□ 0.55
TRGV1A0A0A0MS02 MIR6090-201ENST00000622481 60 ntBASIC18.51■□□□□ 0.55
TRGV1A0A0A0MS02 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRGV1A0A0A0MS02 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRGV1A0A0A0MS02 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRGV1A0A0A0MS02 AP004833.2-201ENST00000532228 1454 ntBASIC18.5■□□□□ 0.55
TRGV1A0A0A0MS02 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRGV1A0A0A0MS02 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 AC087741.3-201ENST00000624270 1347 ntBASIC18.49■□□□□ 0.55
TRGV1A0A0A0MS02 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV1A0A0A0MS02 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.48■□□□□ 0.55
TRGV1A0A0A0MS02 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms