Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 PTBP1P-201ENST00000554374 1601 ntBASIC19.28■□□□□ 0.68
KRT78Q8N1N4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 BX119927.1-201ENST00000636596 1552 ntBASIC19.27■□□□□ 0.68
KRT78Q8N1N4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 GUSBP6-202ENST00000438529 1198 ntBASIC19.27■□□□□ 0.68
KRT78Q8N1N4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 AL109923.1-201ENST00000618799 583 ntBASIC19.27■□□□□ 0.68
KRT78Q8N1N4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
KRT78Q8N1N4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT78Q8N1N4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT78Q8N1N4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
KRT78Q8N1N4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT78Q8N1N4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 KRT16P6-202ENST00000425692 1426 ntBASIC19.26■□□□□ 0.67
KRT78Q8N1N4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.26■□□□□ 0.67
KRT78Q8N1N4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.26■□□□□ 0.67
KRT78Q8N1N4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 AC023632.3-201ENST00000521633 145 ntBASIC19.26■□□□□ 0.67
KRT78Q8N1N4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT78Q8N1N4 AL391422.3-201ENST00000603791 2761 ntBASIC19.26■□□□□ 0.67
KRT78Q8N1N4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
KRT78Q8N1N4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms