RNA–Protein interactions for RNA: ENST00000542456.5

ST6GALNAC6-215, Transcript of ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, human

TSL 2 BASIC

Gene ST6GALNAC6, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ST6GALNAC6-215	ENST00000542456	NISCH	Q9Y2I1	1504 aa		45.97	■■■■■ 4.95
ST6GALNAC6-215	ENST00000542456	CCDC180	Q9P1Z9	1646 aa		40.21	■■■■■ 4.03
ST6GALNAC6-215	ENST00000542456	ZCCHC6	Q5VYS8	1495 aa	Known RBP	38.53	■■■■□ 3.76
ST6GALNAC6-215	ENST00000542456	ABCC9	O60706	1549 aa		38.34	■■■■□ 3.73
ST6GALNAC6-215	ENST00000542456	DCAF8L2	P0C7V8	631 aa		38.16	■■■■□ 3.7
ST6GALNAC6-215	ENST00000542456	DCAF1	Q9Y4B6	1507 aa		37.99	■■■■□ 3.67
ST6GALNAC6-215	ENST00000542456	MYO15B	Q96JP2	1530 aa		37.65	■■■■□ 3.62
ST6GALNAC6-215	ENST00000542456	NACAD	O15069	1562 aa		37.54	■■■■□ 3.6
ST6GALNAC6-215	ENST00000542456	SHROOM4	Q9ULL8	1493 aa		37.33	■■■■□ 3.57
ST6GALNAC6-215	ENST00000542456	RB1CC1	Q8TDY2	1594 aa		37.3	■■■■□ 3.56
ST6GALNAC6-215	ENST00000542456	SCRIB	Q14160	1630 aa		36.96	■■■■□ 3.51
ST6GALNAC6-215	ENST00000542456	UNC13A	Q9UPW8	1703 aa		36.54	■■■■□ 3.44
ST6GALNAC6-215	ENST00000542456	BICRA	Q9NZM4	1560 aa		36.17	■■■■□ 3.38
ST6GALNAC6-215	ENST00000542456	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.13	■■■■□ 3.37
ST6GALNAC6-215	ENST00000542456	SUPT5H	O00267	1087 aa	Known RBP	35.78	■■■■□ 3.32
ST6GALNAC6-215	ENST00000542456	CECR2	Q9BXF3	1484 aa		35.76	■■■■□ 3.31
ST6GALNAC6-215	ENST00000542456	RSF1	Q96T23	1441 aa	Predicted RBP	35.55	■■■■□ 3.28
ST6GALNAC6-215	ENST00000542456	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.52	■■■■□ 3.28
ST6GALNAC6-215	ENST00000542456	MROH2B	Q7Z745	1585 aa		35.51	■■■■□ 3.28
ST6GALNAC6-215	ENST00000542456	SMARCA4	P51532	1647 aa		35.4	■■■■□ 3.26
ST6GALNAC6-215	ENST00000542456	WIZ	O95785	1651 aa		35.21	■■■■□ 3.23
ST6GALNAC6-215	ENST00000542456	EIF4G1	Q04637	1599 aa	Known RBP	35.11	■■■■□ 3.21
ST6GALNAC6-215	ENST00000542456	PEG3	Q9GZU2	1588 aa		34.96	■■■■□ 3.19
ST6GALNAC6-215	ENST00000542456	ATAD2B	Q9ULI0	1458 aa		34.9	■■■■□ 3.18
ST6GALNAC6-215	ENST00000542456	SMARCA2	P51531	1590 aa		34.87	■■■■□ 3.17
ST6GALNAC6-215	ENST00000542456	TOP2A	P11388	1531 aa	Known RBP	34.82	■■■■□ 3.16
ST6GALNAC6-215	ENST00000542456	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.7	■■■■□ 3.14
ST6GALNAC6-215	ENST00000542456	CC2D2A	Q9P2K1	1620 aa		34.68	■■■■□ 3.14
ST6GALNAC6-215	ENST00000542456	NCAPD3	P42695	1498 aa		34.66	■■■■□ 3.14
ST6GALNAC6-215	ENST00000542456	HMGXB3	Q12766	1538 aa		34.56	■■■■□ 3.12
ST6GALNAC6-215	ENST00000542456	CCDC88B	A6NC98	1476 aa		34.48	■■■■□ 3.11
ST6GALNAC6-215	ENST00000542456	DNAJC5B	Q9UF47	199 aa		34.13	■■■■□ 3.05
ST6GALNAC6-215	ENST00000542456	CHIC1	Q5VXU3	224 aa		34.07	■■■■□ 3.04
ST6GALNAC6-215	ENST00000542456	CFTR	P13569	1480 aa		33.8	■■■■□ 3
ST6GALNAC6-215	ENST00000542456	CADPS	Q9ULU8	1353 aa		33.76	■■■■□ 3
ST6GALNAC6-215	ENST00000542456	TRIM41	Q8WV44	630 aa		33.65	■■■□□ 2.98
ST6GALNAC6-215	ENST00000542456	ABCC8	Q09428	1581 aa		33.65	■■■□□ 2.98
ST6GALNAC6-215	ENST00000542456	PRDM2	Q13029	1718 aa		33.6	■■■□□ 2.97
ST6GALNAC6-215	ENST00000542456	NES	P48681	1621 aa		33.56	■■■□□ 2.96
ST6GALNAC6-215	ENST00000542456	LAMC3	Q9Y6N6	1575 aa		33.53	■■■□□ 2.96
ST6GALNAC6-215	ENST00000542456	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.47	■■■□□ 2.95
ST6GALNAC6-215	ENST00000542456	FANCD2	Q9BXW9	1451 aa		33.38	■■■□□ 2.93
ST6GALNAC6-215	ENST00000542456	SYNJ1	O43426	1573 aa		33.33	■■■□□ 2.93
ST6GALNAC6-215	ENST00000542456	PDS5B	Q9NTI5	1447 aa		33.3	■■■□□ 2.92
ST6GALNAC6-215	ENST00000542456	TOP2B	Q02880	1626 aa		33.23	■■■□□ 2.91
ST6GALNAC6-215	ENST00000542456	CUX1	P39880	1505 aa		33.22	■■■□□ 2.91
ST6GALNAC6-215	ENST00000542456	CEP164	Q9UPV0	1460 aa		33.2	■■■□□ 2.91
ST6GALNAC6-215	ENST00000542456	BIVM-ERCC5	R4GMW8	1640 aa		33.19	■■■□□ 2.9
ST6GALNAC6-215	ENST00000542456	KIF21A	Q7Z4S6	1674 aa		33.15	■■■□□ 2.9
ST6GALNAC6-215	ENST00000542456	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.04	■■■□□ 2.88
ST6GALNAC6-215	ENST00000542456	DNMBP	Q6XZF7	1577 aa		33.01	■■■□□ 2.88
ST6GALNAC6-215	ENST00000542456	TOPBP1	Q92547	1522 aa		32.99	■■■□□ 2.87
ST6GALNAC6-215	ENST00000542456	URB2	Q14146	1524 aa	Known RBP	32.98	■■■□□ 2.87
ST6GALNAC6-215	ENST00000542456	SOGA1	O94964	1423 aa		32.96	■■■□□ 2.87
ST6GALNAC6-215	ENST00000542456	ERCC6	Q03468	1493 aa		32.91	■■■□□ 2.86
ST6GALNAC6-215	ENST00000542456	FGD5	Q6ZNL6	1462 aa		32.91	■■■□□ 2.86
ST6GALNAC6-215	ENST00000542456	MRC2	Q9UBG0	1479 aa		32.87	■■■□□ 2.85
ST6GALNAC6-215	ENST00000542456	RUSC2	Q8N2Y8	1516 aa		32.86	■■■□□ 2.85
ST6GALNAC6-215	ENST00000542456	EEA1	Q15075	1411 aa		32.83	■■■□□ 2.85
ST6GALNAC6-215	ENST00000542456	POLA1	P09884	1462 aa	Predicted RBP	32.79	■■■□□ 2.84
ST6GALNAC6-215	ENST00000542456	LOC105371045	A0A1W2PR82	267 aa		32.77	■■■□□ 2.84
ST6GALNAC6-215	ENST00000542456	CSRNP3	Q8WYN3	585 aa		32.72	■■■□□ 2.83
ST6GALNAC6-215	ENST00000542456	RAD54L2	Q9Y4B4	1467 aa		32.7	■■■□□ 2.83
ST6GALNAC6-215	ENST00000542456	WDR62	O43379	1518 aa		32.7	■■■□□ 2.82
ST6GALNAC6-215	ENST00000542456	THOC2	Q8NI27	1593 aa	Known RBP	32.66	■■■□□ 2.82
ST6GALNAC6-215	ENST00000542456	KIF27	Q86VH2	1401 aa		32.66	■■■□□ 2.82
ST6GALNAC6-215	ENST00000542456	CUX2	O14529	1486 aa		32.65	■■■□□ 2.82
ST6GALNAC6-215	ENST00000542456	ABCA10	Q8WWZ4	1543 aa		32.61	■■■□□ 2.81
ST6GALNAC6-215	ENST00000542456	EHMT2	Q96KQ7	1210 aa		32.6	■■■□□ 2.81
ST6GALNAC6-215	ENST00000542456	WDR97	A6NE52	1622 aa		32.51	■■■□□ 2.79
ST6GALNAC6-215	ENST00000542456	TARBP1	Q13395	1621 aa	Known RBP	32.5	■■■□□ 2.79
ST6GALNAC6-215	ENST00000542456	TDRD9	Q8NDG6	1382 aa	Known RBP	32.43	■■■□□ 2.78
ST6GALNAC6-215	ENST00000542456	IFT140	Q96RY7	1462 aa		32.42	■■■□□ 2.78
ST6GALNAC6-215	ENST00000542456	IGF1R	P08069	1367 aa		32.41	■■■□□ 2.78
ST6GALNAC6-215	ENST00000542456	KIF21B	O75037	1637 aa		32.4	■■■□□ 2.78
ST6GALNAC6-215	ENST00000542456	GOLGA3	Q08378	1498 aa		32.36	■■■□□ 2.77
ST6GALNAC6-215	ENST00000542456	ABCA5	Q8WWZ7	1642 aa		32.35	■■■□□ 2.77
ST6GALNAC6-215	ENST00000542456	PRX	Q9BXM0	1461 aa		32.35	■■■□□ 2.77
ST6GALNAC6-215	ENST00000542456	GAPVD1	Q14C86	1478 aa		32.33	■■■□□ 2.77
ST6GALNAC6-215	ENST00000542456	RAPGEF2	Q9Y4G8	1499 aa		32.3	■■■□□ 2.76
ST6GALNAC6-215	ENST00000542456	UBTF	P17480	764 aa	Known RBP	32.29	■■■□□ 2.76
ST6GALNAC6-215	ENST00000542456	AQR	O60306	1485 aa	Known RBP eCLIP	32.27	■■■□□ 2.76	9e-11	■■■■■ 42.1
ST6GALNAC6-215	ENST00000542456	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.26	■■■□□ 2.76
ST6GALNAC6-215	ENST00000542456	CARMIL1	Q5VZK9	1371 aa		32.26	■■■□□ 2.75
ST6GALNAC6-215	ENST00000542456	ERICH3	Q5RHP9	1530 aa		32.24	■■■□□ 2.75
ST6GALNAC6-215	ENST00000542456	TNIK	Q9UKE5	1360 aa		32.21	■■■□□ 2.75
ST6GALNAC6-215	ENST00000542456	CUL7	Q14999	1698 aa		32.16	■■■□□ 2.74
ST6GALNAC6-215	ENST00000542456	PBRM1	Q86U86	1689 aa		32.16	■■■□□ 2.74
ST6GALNAC6-215	ENST00000542456	EIF4G3	O43432	1585 aa	Known RBP	32.13	■■■□□ 2.73
ST6GALNAC6-215	ENST00000542456	GRIN2B	Q13224	1484 aa		32.12	■■■□□ 2.73
ST6GALNAC6-215	ENST00000542456	CEP162	Q5TB80	1403 aa		32	■■■□□ 2.71
ST6GALNAC6-215	ENST00000542456	FHAD1	B1AJZ9	1412 aa		31.98	■■■□□ 2.71
ST6GALNAC6-215	ENST00000542456	ADAMTS12	P58397	1594 aa		31.95	■■■□□ 2.71
ST6GALNAC6-215	ENST00000542456	SNAPC4	Q5SXM2	1469 aa		31.95	■■■□□ 2.7
ST6GALNAC6-215	ENST00000542456	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.88	■■■□□ 2.69
ST6GALNAC6-215	ENST00000542456	RANGAP1	P46060	587 aa	Predicted RBP	31.87	■■■□□ 2.69
ST6GALNAC6-215	ENST00000542456	CLIP1	P30622	1438 aa		31.84	■■■□□ 2.69
ST6GALNAC6-215	ENST00000542456	CTTNBP2	Q8WZ74	1663 aa		31.77	■■■□□ 2.68
ST6GALNAC6-215	ENST00000542456	SYNJ2	O15056	1496 aa		31.76	■■■□□ 2.68
ST6GALNAC6-215	ENST00000542456	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.75	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 76 ms