RNA–Protein interactions for RNA: ENST00000396688.5

SPEG-203, Transcript of SPEG complex locus, humanhuman

TSL 3 BASIC

Gene SPEG, Length 1,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-203ENST00000396688 NISCHQ9Y2I1 1504 aa47.26■■■■■ 5.16
SPEG-203ENST00000396688 CCDC180Q9P1Z9 1646 aa41.83■■■■■ 4.29
SPEG-203ENST00000396688 ABCC9O60706 1549 aa40.19■■■■■ 4.02
SPEG-203ENST00000396688 ZCCHC6Q5VYS8 1495 aaKnown RBP39.51■■■■□ 3.92
SPEG-203ENST00000396688 DCAF8L2P0C7V8 631 aa39.23■■■■□ 3.87
SPEG-203ENST00000396688 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
SPEG-203ENST00000396688 NACADO15069 1562 aa39.16■■■■□ 3.86
SPEG-203ENST00000396688 MYO15BQ96JP2 1530 aa39.13■■■■□ 3.86
SPEG-203ENST00000396688 RB1CC1Q8TDY2 1594 aa39.05■■■■□ 3.84
SPEG-203ENST00000396688 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
SPEG-203ENST00000396688 UNC13AQ9UPW8 1703 aa38.11■■■■□ 3.69
SPEG-203ENST00000396688 BICRAQ9NZM4 1560 aa37.71■■■■□ 3.63
SPEG-203ENST00000396688 SHROOM4Q9ULL8 1493 aa37.66■■■■□ 3.62
SPEG-203ENST00000396688 PABPN1Q86U42 306 aaKnown RBP eCLIP37.62■■■■□ 3.61
SPEG-203ENST00000396688 EIF4G1Q04637 1599 aaKnown RBP36.74■■■■□ 3.47
SPEG-203ENST00000396688 CECR2Q9BXF3 1484 aa36.67■■■■□ 3.46
SPEG-203ENST00000396688 BAZ1AQ9NRL2 1556 aaPredicted RBP36.65■■■■□ 3.46
SPEG-203ENST00000396688 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
SPEG-203ENST00000396688 CC2D2AQ9P2K1 1620 aa36.41■■■■□ 3.42
SPEG-203ENST00000396688 MROH2BQ7Z745 1585 aa36.39■■■■□ 3.42
SPEG-203ENST00000396688 SMARCA2P51531 1590 aa36.25■■■■□ 3.39
SPEG-203ENST00000396688 RSF1Q96T23 1441 aaPredicted RBP36.21■■■■□ 3.39
SPEG-203ENST00000396688 PEG3Q9GZU2 1588 aa36.21■■■■□ 3.39
SPEG-203ENST00000396688 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
SPEG-203ENST00000396688 DNAJC5BQ9UF47 199 aa36.15■■■■□ 3.38
SPEG-203ENST00000396688 NCAPD3P42695 1498 aa36.06■■■■□ 3.36
SPEG-203ENST00000396688 WIZO95785 1651 aa36.06■■■■□ 3.36
SPEG-203ENST00000396688 HMGXB3Q12766 1538 aa36■■■■□ 3.35
SPEG-203ENST00000396688 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
SPEG-203ENST00000396688 SUPT5HO00267 1087 aaKnown RBP35.8■■■■□ 3.32
SPEG-203ENST00000396688 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
SPEG-203ENST00000396688 CCDC88BA6NC98 1476 aa35.28■■■■□ 3.24
SPEG-203ENST00000396688 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
SPEG-203ENST00000396688 CADPSQ9ULU8 1353 aa35.05■■■■□ 3.2
SPEG-203ENST00000396688 CFTRP13569 1480 aa34.98■■■■□ 3.19
SPEG-203ENST00000396688 NESP48681 1621 aa34.92■■■■□ 3.18
SPEG-203ENST00000396688 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
SPEG-203ENST00000396688 PDS5BQ9NTI5 1447 aa34.82■■■■□ 3.16
SPEG-203ENST00000396688 ERCC6Q03468 1493 aa34.69■■■■□ 3.14
SPEG-203ENST00000396688 FANCD2Q9BXW9 1451 aa34.66■■■■□ 3.14
SPEG-203ENST00000396688 KIF21AQ7Z4S6 1674 aa34.62■■■■□ 3.13
SPEG-203ENST00000396688 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
SPEG-203ENST00000396688 MRC2Q9UBG0 1479 aa34.39■■■■□ 3.1
SPEG-203ENST00000396688 THOC2Q8NI27 1593 aaKnown RBP34.33■■■■□ 3.09
SPEG-203ENST00000396688 ABCC8Q09428 1581 aa34.31■■■■□ 3.08
SPEG-203ENST00000396688 WDR62O43379 1518 aa34.24■■■■□ 3.07
SPEG-203ENST00000396688 DNMBPQ6XZF7 1577 aa34.23■■■■□ 3.07
SPEG-203ENST00000396688 URB2Q14146 1524 aaKnown RBP34.22■■■■□ 3.07
SPEG-203ENST00000396688 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.06
SPEG-203ENST00000396688 TOPBP1Q92547 1522 aa34.17■■■■□ 3.06
SPEG-203ENST00000396688 CUX1P39880 1505 aa34.11■■■■□ 3.05
SPEG-203ENST00000396688 CUX2O14529 1486 aa34.08■■■■□ 3.05
SPEG-203ENST00000396688 TOP2BQ02880 1626 aa34.05■■■■□ 3.04
SPEG-203ENST00000396688 BIVM-ERCC5R4GMW8 1640 aa34.05■■■■□ 3.04
SPEG-203ENST00000396688 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
SPEG-203ENST00000396688 FGD5Q6ZNL6 1462 aa33.93■■■■□ 3.02
SPEG-203ENST00000396688 POLA1P09884 1462 aaPredicted RBP33.92■■■■□ 3.02
SPEG-203ENST00000396688 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
SPEG-203ENST00000396688 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
SPEG-203ENST00000396688 SOGA1O94964 1423 aa33.8■■■■□ 3
SPEG-203ENST00000396688 CHIC1Q5VXU3 224 aa33.76■■■■□ 3
SPEG-203ENST00000396688 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
SPEG-203ENST00000396688 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
SPEG-203ENST00000396688 ABCA10Q8WWZ4 1543 aa33.66■■■□□ 2.98
SPEG-203ENST00000396688 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
SPEG-203ENST00000396688 ZNF608Q9ULD9 1512 aaPredicted RBP33.52■■■□□ 2.96
SPEG-203ENST00000396688 EIF4G3O43432 1585 aaKnown RBP33.5■■■□□ 2.95
SPEG-203ENST00000396688 TDRD9Q8NDG6 1382 aaKnown RBP33.48■■■□□ 2.95
SPEG-203ENST00000396688 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
SPEG-203ENST00000396688 ABCA5Q8WWZ7 1642 aa33.46■■■□□ 2.95
SPEG-203ENST00000396688 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
SPEG-203ENST00000396688 AQRO60306 1485 aaKnown RBP eCLIP33.43■■■□□ 2.94
SPEG-203ENST00000396688 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
SPEG-203ENST00000396688 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
SPEG-203ENST00000396688 EEA1Q15075 1411 aa33.3■■■□□ 2.92
SPEG-203ENST00000396688 ERICH3Q5RHP9 1530 aa33.3■■■□□ 2.92
SPEG-203ENST00000396688 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
SPEG-203ENST00000396688 RUSC2Q8N2Y8 1516 aa33.19■■■□□ 2.9
SPEG-203ENST00000396688 SNAPC4Q5SXM2 1469 aa33.19■■■□□ 2.9
SPEG-203ENST00000396688 CUL7Q14999 1698 aa33.16■■■□□ 2.9
SPEG-203ENST00000396688 IGF1RP08069 1367 aa33.15■■■□□ 2.9
SPEG-203ENST00000396688 ADAMTS12P58397 1594 aa33.1■■■□□ 2.89
SPEG-203ENST00000396688 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
SPEG-203ENST00000396688 CSRNP3Q8WYN3 585 aa33.07■■■□□ 2.88
SPEG-203ENST00000396688 SYNJ2O15056 1496 aa33.06■■■□□ 2.88
SPEG-203ENST00000396688 FAM9AQ8IZU1 332 aaPredicted RBP33.05■■■□□ 2.88
SPEG-203ENST00000396688 CARMIL1Q5VZK9 1371 aa33.02■■■□□ 2.88
SPEG-203ENST00000396688 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.88
SPEG-203ENST00000396688 FBLN2P98095 1184 aa32.98■■■□□ 2.87
SPEG-203ENST00000396688 CHD1O14646 1710 aa32.97■■■□□ 2.87
SPEG-203ENST00000396688 PRXQ9BXM0 1461 aa32.92■■■□□ 2.86
SPEG-203ENST00000396688 RAPGEF2Q9Y4G8 1499 aa32.92■■■□□ 2.86
SPEG-203ENST00000396688 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
SPEG-203ENST00000396688 KIF21BO75037 1637 aa32.86■■■□□ 2.85
SPEG-203ENST00000396688 OSCARQ8IYS5 282 aa32.76■■■□□ 2.84
SPEG-203ENST00000396688 GOLGA3Q08378 1498 aa32.72■■■□□ 2.83
SPEG-203ENST00000396688 NUP160Q12769 1436 aa32.72■■■□□ 2.83
SPEG-203ENST00000396688 CEP170Q5SW79 1584 aa32.69■■■□□ 2.82
SPEG-203ENST00000396688 CTTNBP2Q8WZ74 1663 aa32.63■■■□□ 2.81
SPEG-203ENST00000396688 KIAA0586Q9BVV6 1533 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms