Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL1Q6NVV3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL1Q6NVV3 LETM1P2-201ENST00000597330 2178 ntBASIC19.23■□□□□ 0.67
NIPAL1Q6NVV3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL1Q6NVV3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL1Q6NVV3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL1Q6NVV3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 MYC-209ENST00000641252 345 ntBASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL1Q6NVV3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 FP700111.2-201ENST00000619190 1892 ntBASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL1Q6NVV3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL1Q6NVV3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL1Q6NVV3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL1Q6NVV3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms