Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 DUX4L2-201ENST00000561772 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 AC106739.1-201ENST00000617035 715 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4L6-201ENST00000626483 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4L1-201ENST00000627662 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4L8-201ENST00000629013 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4L3-201ENST00000630187 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4L7-201ENST00000630678 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 DUX4L5-201ENST00000630834 1275 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 AC091305.1-201ENST00000479476 895 ntBASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 AC093503.3-201ENST00000624917 2352 ntBASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TMEM56-RWDD3S4R434 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 AIRN-201ENST00000601203 4374 ntBASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM56-RWDD3S4R434 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 IRS3P-201ENST00000223076 1006 ntBASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 KRT18P20-201ENST00000548986 1279 ntBASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 CCDC92B-201ENST00000575506 885 ntBASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms