RNA–Protein interactions for RNA: ENST00000310754.5

TRAM1L1-201, Transcript of translocation associated membrane protein 1 like 1, humanhuman

APPRIS P1 BASIC

Gene TRAM1L1, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1-201ENST00000310754 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
TRAM1L1-201ENST00000310754 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
TRAM1L1-201ENST00000310754 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■□□ 2.99
TRAM1L1-201ENST00000310754 ABCC9O60706 1549 aa33.6■■■□□ 2.97
TRAM1L1-201ENST00000310754 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
TRAM1L1-201ENST00000310754 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
TRAM1L1-201ENST00000310754 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
TRAM1L1-201ENST00000310754 SUPT5HO00267 1087 aaKnown RBP32.89■■■□□ 2.85
TRAM1L1-201ENST00000310754 MYO15BQ96JP2 1530 aa32.75■■■□□ 2.83
TRAM1L1-201ENST00000310754 NACADO15069 1562 aa32.73■■■□□ 2.83
TRAM1L1-201ENST00000310754 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
TRAM1L1-201ENST00000310754 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
TRAM1L1-201ENST00000310754 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
TRAM1L1-201ENST00000310754 UNC13AQ9UPW8 1703 aa31.94■■■□□ 2.7
TRAM1L1-201ENST00000310754 BICRAQ9NZM4 1560 aa31.62■■■□□ 2.65
TRAM1L1-201ENST00000310754 PABPN1Q86U42 306 aaKnown RBP eCLIP31.58■■■□□ 2.65
TRAM1L1-201ENST00000310754 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
TRAM1L1-201ENST00000310754 HRCP23327 699 aa31.03■■■□□ 2.56
TRAM1L1-201ENST00000310754 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
TRAM1L1-201ENST00000310754 LOC105371045A0A1W2PR82 267 aa30.97■■■□□ 2.55
TRAM1L1-201ENST00000310754 PCGF6Q9BYE7 350 aa30.91■■■□□ 2.54
TRAM1L1-201ENST00000310754 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
TRAM1L1-201ENST00000310754 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
TRAM1L1-201ENST00000310754 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
TRAM1L1-201ENST00000310754 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
TRAM1L1-201ENST00000310754 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
TRAM1L1-201ENST00000310754 WIZO95785 1651 aa30.71■■■□□ 2.51
TRAM1L1-201ENST00000310754 TRIM26Q12899 539 aaPredicted RBP30.53■■■□□ 2.48
TRAM1L1-201ENST00000310754 CC2D2AQ9P2K1 1620 aa30.41■■■□□ 2.46
TRAM1L1-201ENST00000310754 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
TRAM1L1-201ENST00000310754 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
TRAM1L1-201ENST00000310754 ATAD2BQ9ULI0 1458 aa30.37■■■□□ 2.45
TRAM1L1-201ENST00000310754 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
TRAM1L1-201ENST00000310754 FAM9AQ8IZU1 332 aaPredicted RBP30.32■■■□□ 2.44
TRAM1L1-201ENST00000310754 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
TRAM1L1-201ENST00000310754 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
TRAM1L1-201ENST00000310754 DNAJC5BQ9UF47 199 aa30.17■■■□□ 2.42
TRAM1L1-201ENST00000310754 PPARGC1BQ86YN6 1023 aaKnown RBP30.15■■■□□ 2.42
TRAM1L1-201ENST00000310754 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
TRAM1L1-201ENST00000310754 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
TRAM1L1-201ENST00000310754 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.38
TRAM1L1-201ENST00000310754 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
TRAM1L1-201ENST00000310754 EHMT2Q96KQ7 1210 aa29.89■■■□□ 2.38
TRAM1L1-201ENST00000310754 EEA1Q15075 1411 aa29.76■■■□□ 2.35
TRAM1L1-201ENST00000310754 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
TRAM1L1-201ENST00000310754 SOGA1O94964 1423 aa29.65■■■□□ 2.34
TRAM1L1-201ENST00000310754 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
TRAM1L1-201ENST00000310754 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
TRAM1L1-201ENST00000310754 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
TRAM1L1-201ENST00000310754 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
TRAM1L1-201ENST00000310754 GOLGA3Q08378 1498 aa29.45■■■□□ 2.3
TRAM1L1-201ENST00000310754 SYNJ1O43426 1573 aa29.4■■■□□ 2.3
TRAM1L1-201ENST00000310754 CADPSQ9ULU8 1353 aa29.4■■■□□ 2.3
TRAM1L1-201ENST00000310754 CFTRP13569 1480 aa29.38■■■□□ 2.29
TRAM1L1-201ENST00000310754 NESP48681 1621 aa29.33■■■□□ 2.29
TRAM1L1-201ENST00000310754 KIF21BO75037 1637 aa29.32■■■□□ 2.28
TRAM1L1-201ENST00000310754 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
TRAM1L1-201ENST00000310754 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
TRAM1L1-201ENST00000310754 LAMC3Q9Y6N6 1575 aa29.28■■■□□ 2.28
TRAM1L1-201ENST00000310754 PRDM2Q13029 1718 aa29.22■■■□□ 2.27
TRAM1L1-201ENST00000310754 TOP2BQ02880 1626 aa29.15■■■□□ 2.26
TRAM1L1-201ENST00000310754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
TRAM1L1-201ENST00000310754 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
TRAM1L1-201ENST00000310754 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
TRAM1L1-201ENST00000310754 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
TRAM1L1-201ENST00000310754 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
TRAM1L1-201ENST00000310754 CLIP1P30622 1438 aa29.04■■■□□ 2.24
TRAM1L1-201ENST00000310754 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
TRAM1L1-201ENST00000310754 RAPGEF2Q9Y4G8 1499 aa28.98■■■□□ 2.23
TRAM1L1-201ENST00000310754 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
TRAM1L1-201ENST00000310754 VPS8Q8N3P4 1428 aa28.96■■■□□ 2.23
TRAM1L1-201ENST00000310754 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.22
TRAM1L1-201ENST00000310754 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
TRAM1L1-201ENST00000310754 PRXQ9BXM0 1461 aa28.82■■■□□ 2.2
TRAM1L1-201ENST00000310754 CUX1P39880 1505 aa28.8■■■□□ 2.2
TRAM1L1-201ENST00000310754 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
TRAM1L1-201ENST00000310754 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
TRAM1L1-201ENST00000310754 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
TRAM1L1-201ENST00000310754 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
TRAM1L1-201ENST00000310754 APLP2Q06481 763 aa28.69■■■□□ 2.18
TRAM1L1-201ENST00000310754 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
TRAM1L1-201ENST00000310754 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
TRAM1L1-201ENST00000310754 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
TRAM1L1-201ENST00000310754 WDR62O43379 1518 aa28.6■■■□□ 2.17
TRAM1L1-201ENST00000310754 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
TRAM1L1-201ENST00000310754 DIEXFQ68CQ4 756 aaKnown RBP28.55■■■□□ 2.16
TRAM1L1-201ENST00000310754 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
TRAM1L1-201ENST00000310754 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
TRAM1L1-201ENST00000310754 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
TRAM1L1-201ENST00000310754 SCAF1Q9H7N4 1312 aaKnown RBP28.43■■■□□ 2.14
TRAM1L1-201ENST00000310754 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
TRAM1L1-201ENST00000310754 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
TRAM1L1-201ENST00000310754 CUX2O14529 1486 aa28.39■■■□□ 2.14
TRAM1L1-201ENST00000310754 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
TRAM1L1-201ENST00000310754 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
TRAM1L1-201ENST00000310754 IGF1RP08069 1367 aa28.32■■■□□ 2.12
TRAM1L1-201ENST00000310754 RRBP1Q9P2E9 1410 aaKnown RBP28.31■■■□□ 2.12
TRAM1L1-201ENST00000310754 ABCA10Q8WWZ4 1543 aa28.29■■■□□ 2.12
TRAM1L1-201ENST00000310754 ACIN1Q9UKV3 1341 aaKnown RBP28.29■■■□□ 2.12
TRAM1L1-201ENST00000310754 CLSPNQ9HAW4 1339 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms