Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH20Q9HBT6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH20Q9HBT6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH20Q9HBT6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH20Q9HBT6 AC020907.5-201ENST00000624372 1936 ntBASIC17.49■□□□□ 0.39
CDH20Q9HBT6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH20Q9HBT6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 MYC-209ENST00000641252 345 ntBASIC17.48■□□□□ 0.39
CDH20Q9HBT6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH20Q9HBT6 FEM1AP1-201ENST00000431297 1995 ntBASIC17.48■□□□□ 0.39
CDH20Q9HBT6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH20Q9HBT6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 HCG11-201ENST00000411553 5696 ntBASIC17.46■□□□□ 0.39
CDH20Q9HBT6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 AC073314.1-201ENST00000568729 2216 ntBASIC17.46■□□□□ 0.39
CDH20Q9HBT6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 AC083880.1-201ENST00000608266 535 ntBASIC17.46■□□□□ 0.39
CDH20Q9HBT6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH20Q9HBT6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH20Q9HBT6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.46■□□□□ 0.38
CDH20Q9HBT6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH20Q9HBT6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 AL390719.1-204ENST00000412397 1219 ntBASIC17.45■□□□□ 0.38
CDH20Q9HBT6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 1140 ms