Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.965e-42■■■□□ 16.1
DKC1O60832 AP1G1-211ENST00000565642 2794 ntTSL 56.58□□□□□ -1.365e-42■■■□□ 16.1
DKC1O60832 AP1G1-213ENST00000566179 562 ntTSL 52.58□□□□□ -25e-42■■■□□ 16.1
DKC1O60832 SNORD71-201ENST00000411292 86 ntBASIC0.39□□□□□ -2.355e-42■■■□□ 16.1
DKC1O60832 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC12.51□□□□□ -0.411e-323■■■□□ 16
DKC1O60832 SNORA2A-201ENST00000383885 135 ntBASIC-0.08□□□□□ -2.423e-86■■■□□ 16
DKC1O60832 EIF4G2-218ENST00000531416 1969 ntTSL 217.59■□□□□ 0.412e-72■■■□□ 16
DKC1O60832 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)10.5□□□□□ -0.732e-72■■■□□ 16
DKC1O60832 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.752e-72■■■□□ 16
DKC1O60832 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.772e-72■■■□□ 16
DKC1O60832 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.022e-72■■■□□ 16
DKC1O60832 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.082e-72■■■□□ 16
DKC1O60832 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.162e-72■■■□□ 16
DKC1O60832 EIF4G2-215ENST00000530564 849 ntTSL 26.44□□□□□ -1.382e-72■■■□□ 16
DKC1O60832 SNORD97-201ENST00000459187 142 ntBASIC3.16□□□□□ -1.92e-72■■■□□ 16
DKC1O60832 EIF4G2-222ENST00000532120 223 ntTSL 31.47□□□□□ -2.172e-72■■■□□ 16
DKC1O60832 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.76■■■□□ 2.512e-7■■■□□ 15.9
DKC1O60832 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.09■■■□□ 2.252e-7■■■□□ 15.9
DKC1O60832 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.76■■□□□ 1.392e-7■■■□□ 15.9
DKC1O60832 RDX-211ENST00000530749 2558 ntTSL 223.38■■□□□ 1.332e-7■■■□□ 15.9
DKC1O60832 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.73■■□□□ 1.072e-7■■■□□ 15.9
DKC1O60832 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.422e-7■■■□□ 15.9
DKC1O60832 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.88■□□□□ 0.132e-7■■■□□ 15.9
DKC1O60832 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.841e-323■■■□□ 15.9
DKC1O60832 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.581e-323■■■□□ 15.9
DKC1O60832 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.651e-323■■■□□ 15.9
DKC1O60832 RPL32-201ENST00000273223 567 ntTSL 3 BASIC10.21□□□□□ -0.771e-323■■■□□ 15.9
DKC1O60832 RPL32-205ENST00000434963 439 ntTSL 59.96□□□□□ -0.821e-323■■■□□ 15.9
DKC1O60832 SNORA7A-201ENST00000384765 139 ntBASIC7.47□□□□□ -1.211e-323■■■□□ 15.9
DKC1O60832 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.231e-323■■■□□ 15.9
DKC1O60832 RPL32-207ENST00000452606 631 ntTSL 26.94□□□□□ -1.31e-323■■■□□ 15.9
DKC1O60832 RPL32-208ENST00000457131 555 ntTSL 26.22□□□□□ -1.411e-323■■■□□ 15.9
DKC1O60832 SHANK2-220ENST00000608988 1879 ntTSL 523.5■■□□□ 1.359e-8■■■□□ 15.9
DKC1O60832 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.991e-6■■■□□ 15.9
DKC1O60832 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.81e-6■■■□□ 15.9
DKC1O60832 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.651e-6■■■□□ 15.9
DKC1O60832 SNORA14A-201ENST00000364773 135 ntBASIC3.58□□□□□ -1.841e-323■■■□□ 15.8
DKC1O60832 SNORA16A-202ENST00000628458 135 ntBASIC7.58□□□□□ -1.21e-323■■■□□ 15.8
DKC1O60832 SNORA16A-201ENST00000384342 137 ntBASIC6.02□□□□□ -1.451e-323■■■□□ 15.8
DKC1O60832 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.7■■■□□ 2.021e-323■■■□□ 15.8
DKC1O60832 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.29■□□□□ 0.21e-323■■■□□ 15.8
DKC1O60832 RPL27A-203ENST00000525981 297 ntTSL 516.29■□□□□ 0.21e-323■■■□□ 15.8
DKC1O60832 RPL27A-212ENST00000534599 651 ntTSL 514.73□□□□□ -0.051e-323■■■□□ 15.8
DKC1O60832 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.261e-323■■■□□ 15.8
DKC1O60832 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC11.78□□□□□ -0.521e-323■■■□□ 15.8
DKC1O60832 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.18□□□□□ -1.261e-323■■■□□ 15.8
DKC1O60832 GSE1-216ENST00000637419 2683 ntTSL 520.83■□□□□ 0.922e-6■■■□□ 15.8
DKC1O60832 AC092127.1-201ENST00000567093 3455 ntBASIC17.34■□□□□ 0.372e-6■■■□□ 15.8
DKC1O60832 GSE1-215ENST00000635906 666 ntTSL 313.68□□□□□ -0.222e-6■■■□□ 15.8
DKC1O60832 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.09■■□□□ 1.612e-8■■■□□ 15.8
DKC1O60832 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.252e-8■■■□□ 15.8
DKC1O60832 LRIG1-209ENST00000498287 689 ntTSL 419.87■□□□□ 0.772e-8■■■□□ 15.8
DKC1O60832 LRIG1-203ENST00000475366 504 ntTSL 46.42□□□□□ -1.382e-8■■■□□ 15.8
DKC1O60832 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.52■■□□□ 1.689e-9■■■□□ 15.7
DKC1O60832 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.21■■□□□ 1.639e-9■■■□□ 15.7
DKC1O60832 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.69e-9■■■□□ 15.7
DKC1O60832 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.67■■□□□ 1.549e-9■■■□□ 15.7
DKC1O60832 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.54■■□□□ 1.29e-9■■■□□ 15.7
DKC1O60832 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.4■■□□□ 1.029e-9■■■□□ 15.7
DKC1O60832 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.839e-9■■■□□ 15.7
DKC1O60832 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.02■□□□□ 0.89e-9■■■□□ 15.7
DKC1O60832 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.59e-9■■■□□ 15.7
DKC1O60832 IRF3-211ENST00000596644 550 ntTSL 216.84■□□□□ 0.299e-9■■■□□ 15.7
DKC1O60832 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.36■□□□□ 0.219e-9■■■□□ 15.7
DKC1O60832 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.11■□□□□ 0.179e-9■■■□□ 15.7
DKC1O60832 IRF3-224ENST00000599680 472 ntTSL 316.11■□□□□ 0.179e-9■■■□□ 15.7
DKC1O60832 IRF3-219ENST00000597636 2874 ntTSL 516■□□□□ 0.159e-9■■■□□ 15.7
DKC1O60832 IRF3-212ENST00000596756 931 ntTSL 515.2■□□□□ 0.029e-9■■■□□ 15.7
DKC1O60832 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.16■□□□□ 0.029e-9■■■□□ 15.7
DKC1O60832 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.64□□□□□ -0.079e-9■■■□□ 15.7
DKC1O60832 FCHSD2-206ENST00000422375 587 ntTSL 413.54□□□□□ -0.249e-9■■■□□ 15.7
DKC1O60832 KCNIP2-209ENST00000434163 534 ntTSL 1 (best)11.1□□□□□ -0.639e-9■■■□□ 15.7
DKC1O60832 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.469e-9■■■□□ 15.7
DKC1O60832 MBNL2-205ENST00000449284 581 ntTSL 24.48□□□□□ -1.699e-9■■■□□ 15.7
DKC1O60832 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.16■■□□□ 1.143e-9■■■□□ 15.7
DKC1O60832 AP000662.2-201ENST00000528466 567 ntTSL 418.38■□□□□ 0.533e-9■■■□□ 15.7
DKC1O60832 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.62■□□□□ 0.577e-7■■■□□ 15.6
DKC1O60832 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.257e-7■■■□□ 15.6
DKC1O60832 SNORA24.1-201ENST00000384401 135 ntBASIC2.83□□□□□ -1.967e-7■■■□□ 15.6
DKC1O60832 SNORD65B-201ENST00000459126 73 ntBASIC1.54□□□□□ -2.163e-37■■■□□ 15.6
DKC1O60832 SNHG1-216ENST00000541416 996 ntTSL 213.77□□□□□ -0.211e-6■■■□□ 15.6
DKC1O60832 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.991e-7■■■□□ 15.6
DKC1O60832 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.11e-7■■■□□ 15.6
DKC1O60832 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.181e-7■■■□□ 15.6
DKC1O60832 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.41e-7■■■□□ 15.6
DKC1O60832 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.35■■□□□ 1.493e-11■■■□□ 15.6
DKC1O60832 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.6■■□□□ 1.373e-11■■■□□ 15.6
DKC1O60832 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.57■■□□□ 1.043e-11■■■□□ 15.6
DKC1O60832 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.813e-11■■■□□ 15.6
DKC1O60832 VPS53-215ENST00000573028 3204 ntTSL 217.96■□□□□ 0.473e-11■■■□□ 15.6
DKC1O60832 VPS53-218ENST00000575207 575 ntTSL 417.8■□□□□ 0.443e-11■■■□□ 15.6
DKC1O60832 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.04■□□□□ 0.163e-11■■■□□ 15.6
DKC1O60832 VPS53-202ENST00000389040 1903 ntTSL 1 (best)11.38□□□□□ -0.593e-11■■■□□ 15.6
DKC1O60832 VPS53-220ENST00000576149 2444 ntTSL 510.87□□□□□ -0.673e-11■■■□□ 15.6
DKC1O60832 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC10.25□□□□□ -0.773e-11■■■□□ 15.6
DKC1O60832 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.133e-11■■■□□ 15.6
DKC1O60832 VPS53-213ENST00000572334 561 ntTSL 57.49□□□□□ -1.213e-11■■■□□ 15.6
DKC1O60832 VPS53-219ENST00000576019 613 ntTSL 36.38□□□□□ -1.393e-11■■■□□ 15.6
DKC1O60832 SNORD116-26-201ENST00000516006 96 ntBASIC5.08□□□□□ -1.62e-76■■■□□ 15.5
DKC1O60832 SNHG17-205ENST00000424235 764 ntTSL 218.1■□□□□ 0.491e-323■■■□□ 15.5
Retrieved 100 of 8,567 protein–RNA pairs in 91.4 ms