RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
IRF3-211ENST00000596644 CCDC180Q9P1Z9 1646 aa32.25■■■□□ 2.75
IRF3-211ENST00000596644 ABCC9O60706 1549 aa31.49■■■□□ 2.63
IRF3-211ENST00000596644 RB1CC1Q8TDY2 1594 aa30.32■■■□□ 2.45
IRF3-211ENST00000596644 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
IRF3-211ENST00000596644 NACADO15069 1562 aa30.28■■■□□ 2.44
IRF3-211ENST00000596644 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
IRF3-211ENST00000596644 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
IRF3-211ENST00000596644 DCAF1Q9Y4B6 1507 aa29.98■■■□□ 2.39
IRF3-211ENST00000596644 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
IRF3-211ENST00000596644 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
IRF3-211ENST00000596644 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.33e-9■■■■■ 34.5
IRF3-211ENST00000596644 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
IRF3-211ENST00000596644 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
IRF3-211ENST00000596644 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
IRF3-211ENST00000596644 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
IRF3-211ENST00000596644 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
IRF3-211ENST00000596644 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
IRF3-211ENST00000596644 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
IRF3-211ENST00000596644 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
IRF3-211ENST00000596644 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
IRF3-211ENST00000596644 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
IRF3-211ENST00000596644 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
IRF3-211ENST00000596644 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
IRF3-211ENST00000596644 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
IRF3-211ENST00000596644 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
IRF3-211ENST00000596644 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
IRF3-211ENST00000596644 WIZO95785 1651 aa27.67■■■□□ 2.02
IRF3-211ENST00000596644 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
IRF3-211ENST00000596644 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
IRF3-211ENST00000596644 NESP48681 1621 aa27.25■■□□□ 1.95
IRF3-211ENST00000596644 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
IRF3-211ENST00000596644 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
IRF3-211ENST00000596644 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
IRF3-211ENST00000596644 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
IRF3-211ENST00000596644 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
IRF3-211ENST00000596644 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
IRF3-211ENST00000596644 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
IRF3-211ENST00000596644 CFTRP13569 1480 aa26.96■■□□□ 1.91
IRF3-211ENST00000596644 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
IRF3-211ENST00000596644 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
IRF3-211ENST00000596644 CUX2O14529 1486 aa26.82■■□□□ 1.88
IRF3-211ENST00000596644 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
IRF3-211ENST00000596644 CEP164Q9UPV0 1460 aa26.8■■□□□ 1.88
IRF3-211ENST00000596644 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
IRF3-211ENST00000596644 WDR62O43379 1518 aa26.65■■□□□ 1.86
IRF3-211ENST00000596644 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
IRF3-211ENST00000596644 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
IRF3-211ENST00000596644 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
IRF3-211ENST00000596644 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
IRF3-211ENST00000596644 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
IRF3-211ENST00000596644 CUX1P39880 1505 aa26.22■■□□□ 1.79
IRF3-211ENST00000596644 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
IRF3-211ENST00000596644 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
IRF3-211ENST00000596644 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
IRF3-211ENST00000596644 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
IRF3-211ENST00000596644 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
IRF3-211ENST00000596644 SOGA1O94964 1423 aa26.06■■□□□ 1.76
IRF3-211ENST00000596644 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
IRF3-211ENST00000596644 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
IRF3-211ENST00000596644 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
IRF3-211ENST00000596644 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
IRF3-211ENST00000596644 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
IRF3-211ENST00000596644 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.741e-7■■■■■ 40.2
IRF3-211ENST00000596644 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
IRF3-211ENST00000596644 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
IRF3-211ENST00000596644 DNAJC5Q9H3Z4 198 aa25.89■■□□□ 1.74
IRF3-211ENST00000596644 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
IRF3-211ENST00000596644 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
IRF3-211ENST00000596644 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
IRF3-211ENST00000596644 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
IRF3-211ENST00000596644 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
IRF3-211ENST00000596644 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
IRF3-211ENST00000596644 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
IRF3-211ENST00000596644 CHD1O14646 1710 aa25.71■■□□□ 1.71
IRF3-211ENST00000596644 MAGI1Q96QZ7 1491 aaPredicted RBP25.69■■□□□ 1.7
IRF3-211ENST00000596644 FBLN2P98095 1184 aa25.66■■□□□ 1.7
IRF3-211ENST00000596644 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
IRF3-211ENST00000596644 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
IRF3-211ENST00000596644 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
IRF3-211ENST00000596644 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
IRF3-211ENST00000596644 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
IRF3-211ENST00000596644 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
IRF3-211ENST00000596644 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
IRF3-211ENST00000596644 GRIN2AQ12879 1464 aa25.43■■□□□ 1.66
IRF3-211ENST00000596644 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
IRF3-211ENST00000596644 IGF1RP08069 1367 aa25.38■■□□□ 1.65
IRF3-211ENST00000596644 CUL7Q14999 1698 aa25.38■■□□□ 1.65
IRF3-211ENST00000596644 RIMBP3CA6NJZ7 1639 aa25.32■■□□□ 1.64
IRF3-211ENST00000596644 RIMBP3BA6NNM3 1639 aa25.32■■□□□ 1.64
IRF3-211ENST00000596644 RIMBP3Q9UFD9 1639 aa25.32■■□□□ 1.64
IRF3-211ENST00000596644 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
IRF3-211ENST00000596644 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
IRF3-211ENST00000596644 NUP160Q12769 1436 aa25.29■■□□□ 1.64
IRF3-211ENST00000596644 RUSC2Q8N2Y8 1516 aa25.29■■□□□ 1.64
IRF3-211ENST00000596644 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
IRF3-211ENST00000596644 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
IRF3-211ENST00000596644 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
IRF3-211ENST00000596644 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
IRF3-211ENST00000596644 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms