RNA–Protein interactions for RNA: ENST00000314138.10

RPL27A-201, Transcript of ribosomal protein L27a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27A, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-201ENST00000314138 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
RPL27A-201ENST00000314138 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
RPL27A-201ENST00000314138 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
RPL27A-201ENST00000314138 MYT1Q01538 1121 aa19.57■□□□□ 0.72
RPL27A-201ENST00000314138 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
RPL27A-201ENST00000314138 SUPT5HO00267 1087 aaKnown RBP19.21■□□□□ 0.67
RPL27A-201ENST00000314138 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
RPL27A-201ENST00000314138 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
RPL27A-201ENST00000314138 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
RPL27A-201ENST00000314138 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
RPL27A-201ENST00000314138 APLP2Q06481 763 aa18.69■□□□□ 0.58
RPL27A-201ENST00000314138 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
RPL27A-201ENST00000314138 HRCP23327 699 aa18.63■□□□□ 0.57
RPL27A-201ENST00000314138 ABCC9O60706 1549 aa18.62■□□□□ 0.57
RPL27A-201ENST00000314138 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
RPL27A-201ENST00000314138 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
RPL27A-201ENST00000314138 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPL27A-201ENST00000314138 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
RPL27A-201ENST00000314138 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
RPL27A-201ENST00000314138 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
RPL27A-201ENST00000314138 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
RPL27A-201ENST00000314138 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
RPL27A-201ENST00000314138 NEFLP07196 543 aa18.1■□□□□ 0.49
RPL27A-201ENST00000314138 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
RPL27A-201ENST00000314138 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
RPL27A-201ENST00000314138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
RPL27A-201ENST00000314138 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
RPL27A-201ENST00000314138 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
RPL27A-201ENST00000314138 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
RPL27A-201ENST00000314138 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
RPL27A-201ENST00000314138 FBLN2P98095 1184 aa17.83■□□□□ 0.45
RPL27A-201ENST00000314138 DIEXFQ68CQ4 756 aaKnown RBP17.72■□□□□ 0.43
RPL27A-201ENST00000314138 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
RPL27A-201ENST00000314138 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
RPL27A-201ENST00000314138 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
RPL27A-201ENST00000314138 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.39
RPL27A-201ENST00000314138 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
RPL27A-201ENST00000314138 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
RPL27A-201ENST00000314138 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
RPL27A-201ENST00000314138 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
RPL27A-201ENST00000314138 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
RPL27A-201ENST00000314138 BCANQ96GW7 911 aa17.34■□□□□ 0.37
RPL27A-201ENST00000314138 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
RPL27A-201ENST00000314138 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
RPL27A-201ENST00000314138 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
RPL27A-201ENST00000314138 EIF5BO60841 1220 aaKnown RBP17.17■□□□□ 0.34
RPL27A-201ENST00000314138 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
RPL27A-201ENST00000314138 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
RPL27A-201ENST00000314138 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
RPL27A-201ENST00000314138 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
RPL27A-201ENST00000314138 ITGAEP38570 1179 aa17.09■□□□□ 0.33
RPL27A-201ENST00000314138 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
RPL27A-201ENST00000314138 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
RPL27A-201ENST00000314138 NACADO15069 1562 aa17.03■□□□□ 0.32
RPL27A-201ENST00000314138 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.31
RPL27A-201ENST00000314138 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
RPL27A-201ENST00000314138 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
RPL27A-201ENST00000314138 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
RPL27A-201ENST00000314138 GLIPR1L2Q4G1C9 344 aa16.99■□□□□ 0.31
RPL27A-201ENST00000314138 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
RPL27A-201ENST00000314138 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
RPL27A-201ENST00000314138 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
RPL27A-201ENST00000314138 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
RPL27A-201ENST00000314138 FKBP8Q14318 412 aa16.88■□□□□ 0.29
RPL27A-201ENST00000314138 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
RPL27A-201ENST00000314138 TRIM52Q96A61 297 aa16.86■□□□□ 0.29
RPL27A-201ENST00000314138 ZNF777Q9ULD5 760 aaPredicted RBP16.84■□□□□ 0.29
RPL27A-201ENST00000314138 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.28
RPL27A-201ENST00000314138 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
RPL27A-201ENST00000314138 ANP32CO43423 234 aa16.8■□□□□ 0.28
RPL27A-201ENST00000314138 NBR1Q14596 966 aa16.78■□□□□ 0.28
RPL27A-201ENST00000314138 ARID4BQ4LE39 1312 aaPredicted RBP16.77■□□□□ 0.28
RPL27A-201ENST00000314138 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
RPL27A-201ENST00000314138 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
RPL27A-201ENST00000314138 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
RPL27A-201ENST00000314138 AEBP2Q6ZN18 517 aaPredicted RBP16.7■□□□□ 0.26
RPL27A-201ENST00000314138 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
RPL27A-201ENST00000314138 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
RPL27A-201ENST00000314138 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
RPL27A-201ENST00000314138 MIER1Q8N108 512 aa16.63■□□□□ 0.25
RPL27A-201ENST00000314138 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
RPL27A-201ENST00000314138 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
RPL27A-201ENST00000314138 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
RPL27A-201ENST00000314138 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
RPL27A-201ENST00000314138 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
RPL27A-201ENST00000314138 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
RPL27A-201ENST00000314138 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
RPL27A-201ENST00000314138 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
RPL27A-201ENST00000314138 NEFMP07197 916 aa16.52■□□□□ 0.23
RPL27A-201ENST00000314138 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
RPL27A-201ENST00000314138 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
RPL27A-201ENST00000314138 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
RPL27A-201ENST00000314138 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
RPL27A-201ENST00000314138 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPL27A-201ENST00000314138 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
RPL27A-201ENST00000314138 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
RPL27A-201ENST00000314138 ANP32BQ92688 251 aaKnown RBP16.41■□□□□ 0.22
RPL27A-201ENST00000314138 HAP1P54257 671 aaPredicted RBP16.4■□□□□ 0.22
RPL27A-201ENST00000314138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPL27A-201ENST00000314138 DEKP35659 375 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms