Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 AL049796.1-201ENST00000565336 1766 ntBASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-6A0A0B4J262 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV8-6A0A0B4J262 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-6A0A0B4J262 PKD1P1-201ENST00000458669 6805 ntBASIC14.71□□□□□ -0.06
TRAV8-6A0A0B4J262 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
TRAV8-6A0A0B4J262 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 AL032819.2-201ENST00000624543 2162 ntBASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-6A0A0B4J262 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-6A0A0B4J262 AC112907.3-201ENST00000577781 2400 ntBASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms