RNA–Protein interactions for RNA: ENST00000397890.6

CRMP1-202, Transcript of collapsin response mediator protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRMP1, Length 2,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRMP1-202ENST00000397890 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
CRMP1-202ENST00000397890 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
CRMP1-202ENST00000397890 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
CRMP1-202ENST00000397890 HRCP23327 699 aa30.6■■■□□ 2.49
CRMP1-202ENST00000397890 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
CRMP1-202ENST00000397890 PCGF6Q9BYE7 350 aa30.28■■■□□ 2.44
CRMP1-202ENST00000397890 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CRMP1-202ENST00000397890 PPARGC1BQ86YN6 1023 aaKnown RBP30.19■■■□□ 2.42
CRMP1-202ENST00000397890 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
CRMP1-202ENST00000397890 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
CRMP1-202ENST00000397890 LOC105371045A0A1W2PR82 267 aa29.63■■■□□ 2.33
CRMP1-202ENST00000397890 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
CRMP1-202ENST00000397890 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
CRMP1-202ENST00000397890 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
CRMP1-202ENST00000397890 SCAF1Q9H7N4 1312 aaKnown RBP28.83■■■□□ 2.21
CRMP1-202ENST00000397890 ZEB1P37275 1124 aaPredicted RBP28.76■■■□□ 2.19
CRMP1-202ENST00000397890 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
CRMP1-202ENST00000397890 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
CRMP1-202ENST00000397890 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
CRMP1-202ENST00000397890 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
CRMP1-202ENST00000397890 ABCC9O60706 1549 aa28.48■■■□□ 2.15
CRMP1-202ENST00000397890 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.13
CRMP1-202ENST00000397890 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
CRMP1-202ENST00000397890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
CRMP1-202ENST00000397890 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
CRMP1-202ENST00000397890 NEUROD1Q13562 356 aa28.18■■■□□ 2.1
CRMP1-202ENST00000397890 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
CRMP1-202ENST00000397890 CCER1Q8TC90 406 aaPredicted RBP28.07■■■□□ 2.08
CRMP1-202ENST00000397890 GTF3C3Q9Y5Q9 886 aa27.97■■■□□ 2.07
CRMP1-202ENST00000397890 TTBK1Q5TCY1 1321 aaPredicted RBP27.91■■■□□ 2.06
CRMP1-202ENST00000397890 DIEXFQ68CQ4 756 aaKnown RBP27.9■■■□□ 2.06
CRMP1-202ENST00000397890 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
CRMP1-202ENST00000397890 CENPBP07199 599 aaPredicted RBP27.77■■■□□ 2.04
CRMP1-202ENST00000397890 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
CRMP1-202ENST00000397890 WIZO95785 1651 aa27.6■■■□□ 2.01
CRMP1-202ENST00000397890 YTHDC1Q96MU7 727 aaKnown RBP27.56■■■□□ 2
CRMP1-202ENST00000397890 ZNF316A6NFI3 1004 aaPredicted RBP27.4■■□□□ 1.98
CRMP1-202ENST00000397890 CEP162Q5TB80 1403 aa27.38■■□□□ 1.97
CRMP1-202ENST00000397890 MYT1Q01538 1121 aa27.37■■□□□ 1.97
CRMP1-202ENST00000397890 ABCC8Q09428 1581 aa27.37■■□□□ 1.97
CRMP1-202ENST00000397890 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
CRMP1-202ENST00000397890 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
CRMP1-202ENST00000397890 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
CRMP1-202ENST00000397890 MIER1Q8N108 512 aa27.28■■□□□ 1.96
CRMP1-202ENST00000397890 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
CRMP1-202ENST00000397890 SOGA1O94964 1423 aa27.25■■□□□ 1.95
CRMP1-202ENST00000397890 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
CRMP1-202ENST00000397890 HNRNPUL2Q1KMD3 747 aaKnown RBP27.15■■□□□ 1.94
CRMP1-202ENST00000397890 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.93
CRMP1-202ENST00000397890 RUSC2Q8N2Y8 1516 aa27.13■■□□□ 1.93
CRMP1-202ENST00000397890 NACADO15069 1562 aa27.12■■□□□ 1.93
CRMP1-202ENST00000397890 CSRNP3Q8WYN3 585 aa27.05■■□□□ 1.92
CRMP1-202ENST00000397890 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.91
CRMP1-202ENST00000397890 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
CRMP1-202ENST00000397890 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
CRMP1-202ENST00000397890 EEA1Q15075 1411 aa26.82■■□□□ 1.88
CRMP1-202ENST00000397890 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
CRMP1-202ENST00000397890 SMARCA4P51532 1647 aa26.77■■□□□ 1.88
CRMP1-202ENST00000397890 CLIP1P30622 1438 aa26.69■■□□□ 1.86
CRMP1-202ENST00000397890 SUPT16HQ9Y5B9 1047 aaKnown RBP26.69■■□□□ 1.86
CRMP1-202ENST00000397890 APLP2Q06481 763 aa26.62■■□□□ 1.85
CRMP1-202ENST00000397890 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
CRMP1-202ENST00000397890 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
CRMP1-202ENST00000397890 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
CRMP1-202ENST00000397890 KIF21BO75037 1637 aa26.5■■□□□ 1.83
CRMP1-202ENST00000397890 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
CRMP1-202ENST00000397890 DHX57Q6P158 1386 aaKnown RBP26.48■■□□□ 1.83
CRMP1-202ENST00000397890 TSHZ2Q9NRE2 1034 aa26.47■■□□□ 1.83
CRMP1-202ENST00000397890 KCNH8Q96L42 1107 aa26.38■■□□□ 1.81
CRMP1-202ENST00000397890 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
CRMP1-202ENST00000397890 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
CRMP1-202ENST00000397890 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
CRMP1-202ENST00000397890 KANK4Q5T7N3 995 aaPredicted RBP26.33■■□□□ 1.81
CRMP1-202ENST00000397890 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
CRMP1-202ENST00000397890 BCANQ96GW7 911 aa26.31■■□□□ 1.8
CRMP1-202ENST00000397890 ANP32EQ9BTT0 268 aa26.27■■□□□ 1.8
CRMP1-202ENST00000397890 ITGAEP38570 1179 aa26.22■■□□□ 1.79
CRMP1-202ENST00000397890 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
CRMP1-202ENST00000397890 FKBP8Q14318 412 aa26.09■■□□□ 1.77
CRMP1-202ENST00000397890 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
CRMP1-202ENST00000397890 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
CRMP1-202ENST00000397890 BCL11AQ9H165 835 aa26.02■■□□□ 1.76
CRMP1-202ENST00000397890 DDX10Q13206 875 aaKnown RBP26.01■■□□□ 1.75
CRMP1-202ENST00000397890 CCNB3Q8WWL7 1395 aa26■■□□□ 1.75
CRMP1-202ENST00000397890 BICRAQ9NZM4 1560 aa25.99■■□□□ 1.75
CRMP1-202ENST00000397890 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
CRMP1-202ENST00000397890 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
CRMP1-202ENST00000397890 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
CRMP1-202ENST00000397890 CUX2O14529 1486 aa25.94■■□□□ 1.74
CRMP1-202ENST00000397890 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
CRMP1-202ENST00000397890 MAPKBP1O60336 1514 aa25.92■■□□□ 1.74
CRMP1-202ENST00000397890 HIRIP3Q9BW71 556 aaPredicted RBP25.92■■□□□ 1.74
CRMP1-202ENST00000397890 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
CRMP1-202ENST00000397890 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
CRMP1-202ENST00000397890 TRIM52Q96A61 297 aa25.89■■□□□ 1.73
CRMP1-202ENST00000397890 RBM19Q9Y4C8 960 aaKnown RBP25.87■■□□□ 1.73
CRMP1-202ENST00000397890 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
CRMP1-202ENST00000397890 ARHGAP35Q9NRY4 1499 aa25.81■■□□□ 1.72
CRMP1-202ENST00000397890 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
CRMP1-202ENST00000397890 NEFLP07196 543 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms