RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
CDK11B-201ENST00000340677 PELP1Q8IZL8 1130 aaKnown RBP30.75■■■□□ 2.51
CDK11B-201ENST00000340677 CCDC180Q9P1Z9 1646 aa30.61■■■□□ 2.49
CDK11B-201ENST00000340677 MYT1Q01538 1121 aa30.31■■■□□ 2.44
CDK11B-201ENST00000340677 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
CDK11B-201ENST00000340677 TTBK1Q5TCY1 1321 aaPredicted RBP29.28■■■□□ 2.28
CDK11B-201ENST00000340677 PRKCSHP14314 528 aaPredicted RBP29.08■■■□□ 2.24
CDK11B-201ENST00000340677 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
CDK11B-201ENST00000340677 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
CDK11B-201ENST00000340677 ABCC9O60706 1549 aa28.57■■■□□ 2.16
CDK11B-201ENST00000340677 SLC24A1O60721 1099 aa28.47■■■□□ 2.15
CDK11B-201ENST00000340677 NACADO15069 1562 aa28.43■■■□□ 2.14
CDK11B-201ENST00000340677 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
CDK11B-201ENST00000340677 APLP2Q06481 763 aa28.31■■■□□ 2.12
CDK11B-201ENST00000340677 ERICH6Q7L0X2 663 aa28.19■■■□□ 2.1
CDK11B-201ENST00000340677 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
CDK11B-201ENST00000340677 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
CDK11B-201ENST00000340677 BCL11AQ9H165 835 aa28.06■■■□□ 2.08
CDK11B-201ENST00000340677 HRCP23327 699 aa28.02■■■□□ 2.08
CDK11B-201ENST00000340677 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
CDK11B-201ENST00000340677 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
CDK11B-201ENST00000340677 FAM9AQ8IZU1 332 aaPredicted RBP27.75■■■□□ 2.03
CDK11B-201ENST00000340677 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
CDK11B-201ENST00000340677 PPARGC1BQ86YN6 1023 aaKnown RBP27.29■■□□□ 1.96
CDK11B-201ENST00000340677 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
CDK11B-201ENST00000340677 DAXXQ9UER7 740 aaPredicted RBP27.16■■□□□ 1.94
CDK11B-201ENST00000340677 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
CDK11B-201ENST00000340677 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
CDK11B-201ENST00000340677 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
CDK11B-201ENST00000340677 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
CDK11B-201ENST00000340677 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
CDK11B-201ENST00000340677 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
CDK11B-201ENST00000340677 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
CDK11B-201ENST00000340677 CENPBP07199 599 aaPredicted RBP26.85■■□□□ 1.89
CDK11B-201ENST00000340677 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
CDK11B-201ENST00000340677 WIZO95785 1651 aa26.68■■□□□ 1.86
CDK11B-201ENST00000340677 EIF5BO60841 1220 aaKnown RBP26.67■■□□□ 1.86
CDK11B-201ENST00000340677 PEG3Q9GZU2 1588 aa26.62■■□□□ 1.85
CDK11B-201ENST00000340677 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
CDK11B-201ENST00000340677 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
CDK11B-201ENST00000340677 ACIN1Q9UKV3 1341 aaKnown RBP26.41■■□□□ 1.82
CDK11B-201ENST00000340677 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
CDK11B-201ENST00000340677 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
CDK11B-201ENST00000340677 ANP32EQ9BTT0 268 aa26.33■■□□□ 1.81
CDK11B-201ENST00000340677 GTF3C3Q9Y5Q9 886 aa26.3■■□□□ 1.8
CDK11B-201ENST00000340677 PLEKHG5O94827 1062 aa26.29■■□□□ 1.8
CDK11B-201ENST00000340677 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
CDK11B-201ENST00000340677 NEUROD1Q13562 356 aa26.21■■□□□ 1.79
CDK11B-201ENST00000340677 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
CDK11B-201ENST00000340677 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
CDK11B-201ENST00000340677 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
CDK11B-201ENST00000340677 PCGF6Q9BYE7 350 aa26.13■■□□□ 1.77
CDK11B-201ENST00000340677 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
CDK11B-201ENST00000340677 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
CDK11B-201ENST00000340677 UBE2Q2Q8WVN8 375 aa26.02■■□□□ 1.76
CDK11B-201ENST00000340677 ANO8Q9HCE9 1232 aaPredicted RBP26.02■■□□□ 1.76
CDK11B-201ENST00000340677 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
CDK11B-201ENST00000340677 PODXL2Q9NZ53 605 aa25.71■■□□□ 1.71
CDK11B-201ENST00000340677 PRDM2Q13029 1718 aa25.64■■□□□ 1.7
CDK11B-201ENST00000340677 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
CDK11B-201ENST00000340677 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
CDK11B-201ENST00000340677 CFTRP13569 1480 aa25.58■■□□□ 1.69
CDK11B-201ENST00000340677 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
CDK11B-201ENST00000340677 PKNOX2Q96KN3 472 aa25.49■■□□□ 1.67
CDK11B-201ENST00000340677 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
CDK11B-201ENST00000340677 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
CDK11B-201ENST00000340677 SALL2Q9Y467 1007 aaPredicted RBP25.35■■□□□ 1.65
CDK11B-201ENST00000340677 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
CDK11B-201ENST00000340677 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
CDK11B-201ENST00000340677 SYNJ1O43426 1573 aa25.33■■□□□ 1.65
CDK11B-201ENST00000340677 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
CDK11B-201ENST00000340677 CCDC136Q96JN2 1154 aa25.28■■□□□ 1.64
CDK11B-201ENST00000340677 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
CDK11B-201ENST00000340677 EEA1Q15075 1411 aa25.21■■□□□ 1.63
CDK11B-201ENST00000340677 CUX1P39880 1505 aa25.17■■□□□ 1.62
CDK11B-201ENST00000340677 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
CDK11B-201ENST00000340677 NESP48681 1621 aa25.1■■□□□ 1.61
CDK11B-201ENST00000340677 NCBP3Q53F19 620 aaKnown RBP25.07■■□□□ 1.6
CDK11B-201ENST00000340677 TSHZ2Q9NRE2 1034 aa25.06■■□□□ 1.6
CDK11B-201ENST00000340677 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
CDK11B-201ENST00000340677 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
CDK11B-201ENST00000340677 SOGA1O94964 1423 aa25.02■■□□□ 1.6
CDK11B-201ENST00000340677 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.6
CDK11B-201ENST00000340677 KLHL34Q8N239 644 aa24.99■■□□□ 1.59
CDK11B-201ENST00000340677 CUX2O14529 1486 aa24.95■■□□□ 1.58
CDK11B-201ENST00000340677 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
CDK11B-201ENST00000340677 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
CDK11B-201ENST00000340677 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
CDK11B-201ENST00000340677 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
CDK11B-201ENST00000340677 KIF21BO75037 1637 aa24.88■■□□□ 1.57
CDK11B-201ENST00000340677 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
CDK11B-201ENST00000340677 ERICH6BQ5W0A0 696 aa24.87■■□□□ 1.57
CDK11B-201ENST00000340677 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
CDK11B-201ENST00000340677 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
CDK11B-201ENST00000340677 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
CDK11B-201ENST00000340677 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
CDK11B-201ENST00000340677 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
CDK11B-201ENST00000340677 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.75■■□□□ 1.55
CDK11B-201ENST00000340677 PDIA4P13667 645 aaKnown RBP24.75■■□□□ 1.55
CDK11B-201ENST00000340677 NEFLP07196 543 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 415.1 ms