Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 YLL054CYLL054C 2532 nt1.42□□□□□ -2.18
SEF1P34228 MSN5YDR335W 3675 nt1.42□□□□□ -2.18
SEF1P34228 LCD1YDR499W 2244 nt1.42□□□□□ -2.18
SEF1P34228 DBP6YNR038W 1890 nt1.41□□□□□ -2.18
SEF1P34228 YDL211CYDL211C 1119 nt1.41□□□□□ -2.18
SEF1P34228 YDR344CYDR344C 444 nt1.41□□□□□ -2.18
SEF1P34228 YDR366CYDR366C 399 nt1.41□□□□□ -2.18
SEF1P34228 YJL015CYJL015C 285 nt1.41□□□□□ -2.18
SEF1P34228 YOR282WYOR282W 321 nt1.41□□□□□ -2.18
SEF1P34228 PIP2YOR363C 2991 nt1.4□□□□□ -2.19
SEF1P34228 FYV8YGR196C 2454 nt1.4□□□□□ -2.19
SEF1P34228 YGL149WYGL149W 306 nt1.4□□□□□ -2.19
SEF1P34228 RPL34BYIL052C 366 nt1.4□□□□□ -2.19
SEF1P34228 YBL008W-AYBL008W-A 240 nt1.4□□□□□ -2.19
SEF1P34228 YPL152W-AYPL152W-A 99 nt1.4□□□□□ -2.19
SEF1P34228 IFH1YLR223C 3258 nt1.39□□□□□ -2.19
SEF1P34228 PET127YOR017W 2403 nt1.39□□□□□ -2.19
SEF1P34228 MDS3YGL197W 4464 nt1.39□□□□□ -2.19
SEF1P34228 YCK3YER123W 1575 nt1.39□□□□□ -2.19
SEF1P34228 CUL3YGR003W 2235 nt1.39□□□□□ -2.19
SEF1P34228 YGR130CYGR130C 2451 nt1.38□□□□□ -2.19
SEF1P34228 AZF1YOR113W 2745 nt1.38□□□□□ -2.19
SEF1P34228 HMRA2YCR096C 360 nt1.38□□□□□ -2.19
SEF1P34228 YHR063W-AYHR063W-A 336 nt1.38□□□□□ -2.19
SEF1P34228 PFD1YJL179W 330 nt1.38□□□□□ -2.19
SEF1P34228 SWI4YER111C 3282 nt1.38□□□□□ -2.19
SEF1P34228 SPT21YMR179W 2277 nt1.37□□□□□ -2.19
SEF1P34228 CCH1YGR217W 6120 nt1.37□□□□□ -2.19
SEF1P34228 SPO75YLL005C 2607 nt1.37□□□□□ -2.19
SEF1P34228 MSH3YCR092C 3057 nt1.36□□□□□ -2.19
SEF1P34228 CLU1YMR012W 3834 nt1.36□□□□□ -2.19
SEF1P34228 NUP188YML103C 4968 nt1.36□□□□□ -2.19
SEF1P34228 snR8snR8 190 nt1.36□□□□□ -2.19
SEF1P34228 SSS1YDR086C 243 nt1.36□□□□□ -2.19
SEF1P34228 YEL020C-BYEL020C-B 198 nt1.36□□□□□ -2.19
SEF1P34228 YIL032CYIL032C 357 nt1.36□□□□□ -2.19
SEF1P34228 PKH2YOL100W 3246 nt1.36□□□□□ -2.19
SEF1P34228 YDR521WYDR521W 336 nt1.35□□□□□ -2.19
SEF1P34228 YGR069WYGR069W 336 nt1.35□□□□□ -2.19
SEF1P34228 YLL007CYLL007C 1998 nt1.35□□□□□ -2.19
SEF1P34228 APL3YBL037W 3078 nt1.35□□□□□ -2.19
SEF1P34228 PTP2YOR208W 2253 nt1.35□□□□□ -2.19
SEF1P34228 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
SEF1P34228 SLD3YGL113W 2007 nt1.34□□□□□ -2.19
SEF1P34228 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
SEF1P34228 MMS4YBR098W 2076 nt1.34□□□□□ -2.19
SEF1P34228 RAD61YDR014W 1944 nt1.34□□□□□ -2.2
SEF1P34228 SEC21YNL287W 2808 nt1.34□□□□□ -2.2
SEF1P34228 PAN2YGL094C 3348 nt1.33□□□□□ -2.2
SEF1P34228 COG8YML071C 1824 nt1.33□□□□□ -2.2
SEF1P34228 AIM44YPL158C 2277 nt1.33□□□□□ -2.2
SEF1P34228 GPG1YGL121C 381 nt1.33□□□□□ -2.2
SEF1P34228 YMR158W-BYMR158W-B 321 nt1.33□□□□□ -2.2
SEF1P34228 YDL206WYDL206W 2289 nt1.32□□□□□ -2.2
SEF1P34228 SET3YKR029C 2256 nt1.32□□□□□ -2.2
SEF1P34228 YHL042WYHL042W 453 nt1.32□□□□□ -2.2
SEF1P34228 INA22YIR024C 651 nt1.32□□□□□ -2.2
SEF1P34228 YJL120WYJL120W 324 nt1.32□□□□□ -2.2
SEF1P34228 RRT15YLR162W-A 189 nt1.32□□□□□ -2.2
SEF1P34228 snR60snR60 104 nt1.31□□□□□ -2.2
SEF1P34228 YBR206WYBR206W 324 nt1.31□□□□□ -2.2
SEF1P34228 CDC39YCR093W 6327 nt1.3□□□□□ -2.2
SEF1P34228 RPS25BYLR333C 327 nt1.3□□□□□ -2.2
SEF1P34228 FIG4YNL325C 2640 nt1.3□□□□□ -2.2
SEF1P34228 NUP145YGL092W 3954 nt1.3□□□□□ -2.2
SEF1P34228 SEC3YER008C 4011 nt1.29□□□□□ -2.2
SEF1P34228 RSM22YKL155C 1887 nt1.29□□□□□ -2.2
SEF1P34228 snR80snR80 171 nt1.29□□□□□ -2.2
SEF1P34228 YLL020CYLL020C 306 nt1.29□□□□□ -2.2
SEF1P34228 YOR015WYOR015W 360 nt1.29□□□□□ -2.2
SEF1P34228 YBR221W-AYBR221W-A 105 nt1.29□□□□□ -2.2
SEF1P34228 STO1YMR125W 2586 nt1.29□□□□□ -2.2
SEF1P34228 PDE2YOR360C 1581 nt1.29□□□□□ -2.2
SEF1P34228 SPO21YOL091W 1830 nt1.29□□□□□ -2.2
SEF1P34228 PBY1YBR094W 2262 nt1.28□□□□□ -2.2
SEF1P34228 YMR321CYMR321C 318 nt1.28□□□□□ -2.2
SEF1P34228 YOR008C-AYOR008C-A 225 nt1.28□□□□□ -2.2
SEF1P34228 LAA1YJL207C 6045 nt1.28□□□□□ -2.21
SEF1P34228 YAR009CYAR009C 3591 nt1.27□□□□□ -2.21
SEF1P34228 VIK1YPL253C 1944 nt1.27□□□□□ -2.21
SEF1P34228 YMR172C-AYMR172C-A 384 nt1.27□□□□□ -2.21
SEF1P34228 YBR064WYBR064W 429 nt1.27□□□□□ -2.21
SEF1P34228 YLR120W-AYLR120W-A 102 nt1.26□□□□□ -2.21
SEF1P34228 EAF1YDR359C 2949 nt1.26□□□□□ -2.21
SEF1P34228 STB6YKL072W 2301 nt1.26□□□□□ -2.21
SEF1P34228 YNL284C-BYNL284C-B 5268 nt1.25□□□□□ -2.21
SEF1P34228 YGL188C-AYGL188C-A 141 nt1.25□□□□□ -2.21
SEF1P34228 PAU12YGR294W 363 nt1.25□□□□□ -2.21
SEF1P34228 CSE2YNR010W 450 nt1.25□□□□□ -2.21
SEF1P34228 snR49snR49 165 nt1.25□□□□□ -2.21
SEF1P34228 PAU24YBR301W 363 nt1.25□□□□□ -2.21
SEF1P34228 ROM2YLR371W 4071 nt1.25□□□□□ -2.21
SEF1P34228 tH(GUG)E1tH(GUG)E1 72 nt1.24□□□□□ -2.21
SEF1P34228 tH(GUG)E2tH(GUG)E2 72 nt1.24□□□□□ -2.21
SEF1P34228 tH(GUG)G1tH(GUG)G1 72 nt1.24□□□□□ -2.21
SEF1P34228 tH(GUG)G2tH(GUG)G2 72 nt1.24□□□□□ -2.21
SEF1P34228 tH(GUG)HtH(GUG)H 72 nt1.24□□□□□ -2.21
SEF1P34228 tH(GUG)KtH(GUG)K 72 nt1.24□□□□□ -2.21
SEF1P34228 tH(GUG)MtH(GUG)M 72 nt1.24□□□□□ -2.21
SEF1P34228 YGL041CYGL041C 204 nt1.24□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms